Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_5273 |
Symbol | |
ID | 5195844 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009507 |
Strand | - |
Start bp | 168777 |
End bp | 169508 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640579200 |
Product | hypothetical protein |
Protein accession | YP_001260148 |
Protein GI | 148550709 |
COG category | [S] Function unknown |
COG ID | [COG3619] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCGCGGTG GGATCGTGAT CTGTCGTGCG GCGGCGCGGC AAGCTGCGCG TAGGGACGCG CCGCCGATGA ACCGCTACGA ACGAAGCGTC TGGGGTCTCG CCGCCTGTTT TTCCGCGCTC GCTGGCTTTG TCGACGCGCT CGGCTTCCTC TATCTCGGCG GCTTCTTTGT CTCCTTCATG AGCGGCAACT CCACGCGGCT TGCTGTCGGC TTGAGCGAGC ATGTCGCAGA CGCCTTGACC GCCGGCGGGC TGATCGCGTC CTTCGTCGTG GGCGTCATGC TCGGCTCGCT GTGCGGACGA ACCATCAGGC GCGCCCGCCA TGGCGCTCTC ATGTACCTCA TCGCGGCCAT GCTGACCGCC GCTTCTTTGC TTGCGGCGGC CGATGCGACC TGGGCCGCGG CTGCGGTGCT CGCCATGGCA ATGGGCGCAG AAAATGCCCT GTTCGAACAT GATGGCGAGG TACAGATCGG CCTCACCTAC ATGACCGGTA CGCTGGTGAA GCTGGGCCAG CGCCTGTTGT CCGCGCTTAT GGGCGGCGAC CGGTTCGGAT GGGTTCCCTA TCTCCTGCTA TGGCTTGGCC TCCTGGCGGG CGCGGTGCTG GGCGCCATGC TGTTCGGCCT CATCGGCCAC CAGGCCATCT GGGTTGCCGC CGCTTCGGCC TTGCTGCTTG GCATCGCTCT CCATCGCCGC GACGTGAACC TGACACCCTC GGCGAAGGCG CCGCGCCCAT GA
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Protein sequence | MRGGIVICRA AARQAARRDA PPMNRYERSV WGLAACFSAL AGFVDALGFL YLGGFFVSFM SGNSTRLAVG LSEHVADALT AGGLIASFVV GVMLGSLCGR TIRRARHGAL MYLIAAMLTA ASLLAAADAT WAAAAVLAMA MGAENALFEH DGEVQIGLTY MTGTLVKLGQ RLLSALMGGD RFGWVPYLLL WLGLLAGAVL GAMLFGLIGH QAIWVAAASA LLLGIALHRR DVNLTPSAKA PRP
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