Gene Swit_5273 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_5273 
Symbol 
ID5195844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009507 
Strand
Start bp168777 
End bp169508 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content67% 
IMG OID640579200 
Producthypothetical protein 
Protein accessionYP_001260148 
Protein GI148550709 
COG category[S] Function unknown 
COG ID[COG3619] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGCGGTG GGATCGTGAT CTGTCGTGCG GCGGCGCGGC AAGCTGCGCG TAGGGACGCG 
CCGCCGATGA ACCGCTACGA ACGAAGCGTC TGGGGTCTCG CCGCCTGTTT TTCCGCGCTC
GCTGGCTTTG TCGACGCGCT CGGCTTCCTC TATCTCGGCG GCTTCTTTGT CTCCTTCATG
AGCGGCAACT CCACGCGGCT TGCTGTCGGC TTGAGCGAGC ATGTCGCAGA CGCCTTGACC
GCCGGCGGGC TGATCGCGTC CTTCGTCGTG GGCGTCATGC TCGGCTCGCT GTGCGGACGA
ACCATCAGGC GCGCCCGCCA TGGCGCTCTC ATGTACCTCA TCGCGGCCAT GCTGACCGCC
GCTTCTTTGC TTGCGGCGGC CGATGCGACC TGGGCCGCGG CTGCGGTGCT CGCCATGGCA
ATGGGCGCAG AAAATGCCCT GTTCGAACAT GATGGCGAGG TACAGATCGG CCTCACCTAC
ATGACCGGTA CGCTGGTGAA GCTGGGCCAG CGCCTGTTGT CCGCGCTTAT GGGCGGCGAC
CGGTTCGGAT GGGTTCCCTA TCTCCTGCTA TGGCTTGGCC TCCTGGCGGG CGCGGTGCTG
GGCGCCATGC TGTTCGGCCT CATCGGCCAC CAGGCCATCT GGGTTGCCGC CGCTTCGGCC
TTGCTGCTTG GCATCGCTCT CCATCGCCGC GACGTGAACC TGACACCCTC GGCGAAGGCG
CCGCGCCCAT GA
 
Protein sequence
MRGGIVICRA AARQAARRDA PPMNRYERSV WGLAACFSAL AGFVDALGFL YLGGFFVSFM 
SGNSTRLAVG LSEHVADALT AGGLIASFVV GVMLGSLCGR TIRRARHGAL MYLIAAMLTA
ASLLAAADAT WAAAAVLAMA MGAENALFEH DGEVQIGLTY MTGTLVKLGQ RLLSALMGGD
RFGWVPYLLL WLGLLAGAVL GAMLFGLIGH QAIWVAAASA LLLGIALHRR DVNLTPSAKA
PRP