| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_5125 |
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| Symbol | |
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| ID | 5195602 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009507 |
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| Strand | - |
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| Start bp | 9061 |
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| End bp | 11685 |
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| Gene Length | 2625 bp |
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| Protein Length | 874 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640579055 |
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| Product | transposase Tn3 family protein |
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| Protein accession | YP_001260003 |
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| Protein GI | 148550564 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4644] Transposase and inactivated derivatives, TnpA family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCGGA GTATTCCGGG CGGGGATTTG ATCGGACGAT GGAGCCTGAG CTTTGCCGAT
ATTGATTTTG TAAATTCGAA GCCGGCCCTG ACGCGCCTTG GCCTCGCCGC GCAGCTGAAA
TTCTTCGCTT CCCTGGGGTT TTTCGCGATC GATCCCGGCT CAATCCCTAC CGATGGCCTC
TCGTATCTGG CCGAGCAACT CGGTGTCGAG GCTGGCGAGA TAGCCGGTTA TGACTTTTCC
AGTCGGACAG CACGACGGCA TTGTGCGGAG ATCCTGATCC ATCTTGGATA TCACCGCATG
AAGCGGGTGG ATCGCGCGCA ATTGACGGAA TGGATTGCTG GCGAGCTGTG CCCGGGCGGC
CAGTCGATCA ATGCCATGCT TGAGCATGTT TTCCTGTGGT GCCGGGACCG GCGTATTTAT
GGGCCGTCGC GCAAGGAGCT TGAACGTGTC GTTCGCTCAC AACGGCAAGA TTATCTGGAC
ACCTGGCTGA TCGGAACCAG TGATCGGCTT TCGTCAGATG CGGTGGCGTT ATTGGAAGCC
TCGCTTGCCG ATCCGGACAG CTCGACCGGA TTCAACAGGA TGAAGGGTGA CGCCGGACAG
GCAACGCTCG ACAACATTCT CGACGTGACC GAGAAACTCG CCTTTATCCA GAGACTTGAT
CTTCCCCATG ATCTCCTGAC GGCTACGGGC AAGCCATGGG TCGATCAGAT TGTTCGCCGC
GTTGCCGGTG AAAAGGCCTC GGAGATGCGC CGGCATGCGC CGGCGCGACA GCTCGGCCTT
TATGCGATTT ATCTAATGTC GCGGGAGGCG CAACTCACTG ACGCGATGAT CGACCTGCTG
ATCGAAACCG TTCACAAGAT CGGAACGCGC TCGAAACGCA AGGTGGTGGG CGATATCGCG
AAAGACATCG AGCGGGTCTA TGGAAAGGAG CGCCTGCTGG TCGAGATCGC CAGCGCCTCG
ATCAATGAAC CATCGGGGCG CATCTGCGAT GTCATTTTCC CGATCGCCGG TAAGGCCAAG
CTGGCGGCGA TCGTCAAGGA GAGCCATGCG AAGGGCGCTC TGGACCGGCG CATCTACAAG
GTGATGCGTG GTTCCTGGGC CAATCATTAC CGGCGCATGC TGCCAAGCCT GCTTTCCGTA
CTTGAGTTCC GGTCGAACAA CGCGGTGTGG CGGCCGGTCC TGGCGGCCCT CGACTGGATC
AGGAGCAAGG TGGATGGCGG ATGCCGCTTC GTGCCATTGC AGGATGTTCC GATCGATGAG
GTGATTCCAG CGCGATGGCG CAGTTCCGTC ATTGATGACG ATGGGCGGGT AAACCGGATC
AGCTATGAGC TTTGCGTCCT GACGCAACTG CGCGACCGCA TCCGCTCCAA AGAAATCTGG
GTGGTCGGGG CGGATCGCTA TCGCAATCCC GATGACGATC TTCCCAAGGA CTTCGAGATC
AGGCGAGATG CGTACTATTC CGGCCTCAGC CTGACGCCAG ATGCGCAGGC GTTTTGCGCC
TCGATCCGGG AGGAGCTTGA ACGGGAACTG TTGCTCCTCA ATGCCAATAT TCCACAAAAC
GACAAGGTCC GGCTCCTGTG GCGCGGCGAC AACCGGATAT CGATTACACC GTTCAAGCCC
TTGCCCGAAC CGAAGGGTCT CGCTTCGATC AAAAGCGAGA TCGGTCAGCG CTGGCCGATG
ACCGGACTGC TGGACGTGTT GAAAGAGGCT GCTCTGGACA CGGGATTGAT GGATGCTTTC
GAAACGTCGG CCTCGCGGGT TACCCTGTCG AAAGCAGCCT TGGCTCAGCG TCTTTTGCTG
TGTCTCTATG GCTTGGGCAC GAACGCCGGG CTCAAGCGGG TCGCTGGCGC AACACCCGAT
GTCAGTTACG AGGAATTGCT GCATGTCCAT CGCCGTTTCA TCCACGCGCC AGCGCTGAGG
GAGGCGTGCG CGCGGGTAGC AAACGCGACA CTGGCAATCC GCAATGCCGC AGTATGGGGA
GATGCGGGCA CGGCATGCGC GTCCGATTCA ACGAAGTTCG GCGCGTGGGA CCGCAACCTG
ATGACGGAAT GGCACGCCCG CTATGGCGGC CGTGGCGTCA TGATCTACTG GCATGTGGAG
AAGCGCGCGA CCTGCGTTTA TTCCCAGCTC AAGCGGTGCT CTTCCTCGGA GGTCGCCTCC
ATGATCGAAG GCGTGCTACG CCATTGCACC GACATGGAAA TCCAGCGCCA GTACGTCGAT
AGCCACGGCC AGAGCGCAGT CGGCTTTGCG TTCTGCCGAC TCCTTGGATT TGAGCTTGCC
CCGCGGCTGA AAGCAGTGGC ACGCCAGAAA CTGGCCCTTC CCCAAGCCGG CATGCGCACG
CGGCTTTCCA ATTTACTGCC GATCCTCTCC AGCCCGATCG ACTGGGACGA GATCGAGCAA
CAATATGACG AAATGGTCAA ATATGCCGCT GCCATGCAAT CGCGCACCGC CGATCCGGAA
GCGATCCTGC TCCGGTTTGC CAGAGCCGAA GTGATGCACC CGACCTACAA GGCGCTGAGT
GAACTCGGCC GCGCGGTCAA AACAATCTTC CTATGCCGGT ATTTGCGTCA GGAGGCATTC
CGCCGCGAGA TCCACGAAGG GCTGAATGTG GTTGTATTCT GTTGA
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| Protein sequence | MDRSIPGGDL IGRWSLSFAD IDFVNSKPAL TRLGLAAQLK FFASLGFFAI DPGSIPTDGL
SYLAEQLGVE AGEIAGYDFS SRTARRHCAE ILIHLGYHRM KRVDRAQLTE WIAGELCPGG
QSINAMLEHV FLWCRDRRIY GPSRKELERV VRSQRQDYLD TWLIGTSDRL SSDAVALLEA
SLADPDSSTG FNRMKGDAGQ ATLDNILDVT EKLAFIQRLD LPHDLLTATG KPWVDQIVRR
VAGEKASEMR RHAPARQLGL YAIYLMSREA QLTDAMIDLL IETVHKIGTR SKRKVVGDIA
KDIERVYGKE RLLVEIASAS INEPSGRICD VIFPIAGKAK LAAIVKESHA KGALDRRIYK
VMRGSWANHY RRMLPSLLSV LEFRSNNAVW RPVLAALDWI RSKVDGGCRF VPLQDVPIDE
VIPARWRSSV IDDDGRVNRI SYELCVLTQL RDRIRSKEIW VVGADRYRNP DDDLPKDFEI
RRDAYYSGLS LTPDAQAFCA SIREELEREL LLLNANIPQN DKVRLLWRGD NRISITPFKP
LPEPKGLASI KSEIGQRWPM TGLLDVLKEA ALDTGLMDAF ETSASRVTLS KAALAQRLLL
CLYGLGTNAG LKRVAGATPD VSYEELLHVH RRFIHAPALR EACARVANAT LAIRNAAVWG
DAGTACASDS TKFGAWDRNL MTEWHARYGG RGVMIYWHVE KRATCVYSQL KRCSSSEVAS
MIEGVLRHCT DMEIQRQYVD SHGQSAVGFA FCRLLGFELA PRLKAVARQK LALPQAGMRT
RLSNLLPILS SPIDWDEIEQ QYDEMVKYAA AMQSRTADPE AILLRFARAE VMHPTYKALS
ELGRAVKTIF LCRYLRQEAF RREIHEGLNV VVFC
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