Gene Swit_5122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_5122 
Symbol 
ID5195722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009507 
Strand
Start bp6236 
End bp7108 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content59% 
IMG OID640579052 
Productresolvase domain-containing protein 
Protein accessionYP_001260000 
Protein GI148550561 
COG category[L] Replication, recombination and repair 
COG ID[COG1961] Site-specific recombinases, DNA invertase Pin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCACTTGG CTCGTATCGG ATATGCCCGC GTCAGCACCA CGGACCAGGA TCTGGATATC 
CAGATTGGCC GCCTCAAGAA TGCAGGTTGC GAAATTATCC GTTCCGAGAC CGGATCGGGG
GCCTCGCGGA GCGGGCGCAC GGAACTGGAA ACGATCATGC AGTTTATGCA CACCGGCGAC
GAGCTGGTCG TGCTGCGGCT CGACCGGCTC GGCCGCTCCA CGCGCGATGT CCTGAACCTG
GTGCATGAGC TTGATGAAAA GGGAGCTTCG CTGCGCATCC TTGAGCCAGA GGTGACGACG
GCGGGCGACA TGGGGCGAAT GGTCATCACC ATACTCGGCA TGGTCGCCGA TATGGAGCTG
AAGTTCATCA AGGATCGTCA GCGCGCCGGG ATCGAAGCGG CGCGCGCCGA AGGCGTTTAC
AAAGGCCGGA AGAAGAACGT CGATGACGAT GAAATCCGCC GTCGCCTTGC CGCCGGCGCC
AGCAAGGCCC GCGTTGCCCG CGACCTGAAG GTCTCACGAA TGACCGTCTA TCGGGCGCTC
GACATTATTC CGTCACAGAC CAAACTGCCG GAAAAGCCGC CCACTGCCAG CATCGCCCTG
CATCTGATTA TCGAGAACTT CAACAAGCGT GGAAGAGGTA GAAAACCCGC TCGGGAGCGG
ATTGAGGCGA TGCTGGAACG CGACTACGCC ATGGTAAAAA ACGGCAATTG TGATTACAAA
CTGACCGTCG CCTATGACCC CGATCCGGAT GGCATTTCCC TTGATGAGGA AATCCAAAGC
CTCCTCTCCG AGATGTTCAA CATCGCAGAG AGCTACAATT GCTCCATGGA AGCCGATATC
TACGAGGTCG GTGGTCAGCA ACGGTCCTGG TAG
 
Protein sequence
MHLARIGYAR VSTTDQDLDI QIGRLKNAGC EIIRSETGSG ASRSGRTELE TIMQFMHTGD 
ELVVLRLDRL GRSTRDVLNL VHELDEKGAS LRILEPEVTT AGDMGRMVIT ILGMVADMEL
KFIKDRQRAG IEAARAEGVY KGRKKNVDDD EIRRRLAAGA SKARVARDLK VSRMTVYRAL
DIIPSQTKLP EKPPTASIAL HLIIENFNKR GRGRKPARER IEAMLERDYA MVKNGNCDYK
LTVAYDPDPD GISLDEEIQS LLSEMFNIAE SYNCSMEADI YEVGGQQRSW