Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_5085 |
Symbol | |
ID | 5196046 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009508 |
Strand | - |
Start bp | 197780 |
End bp | 198442 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640579515 |
Product | maleylacetoacetate isomerase |
Protein accession | YP_001260463 |
Protein GI | 148551033 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0625] Glutathione S-transferase |
TIGRFAM ID | [TIGR01262] maleylacetoacetate isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 71 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCTATT ATGGCTATTG GCGCAGTTCT GCAGCGTGGC GTTGCAGAAT TGCCTTCAAT CTGAAGAAAA TCGCGCCGGA ATTTGTGGCC GTCCATCTCA CACGCGATGG AGGAGCACAG CGGACGGAGG AGTTCCGCGT CATAAATCCG CAGAAGCGGG TACCTGCGCT GGATTTGAAC GGGGCAGTCT TGACCCAATC GCTGGCGATT ATCGAGTGGC TCGAGGAGAC TATCCCGGAG CCAGCTCTTC TGCCGGACGA TCCCTGGTCT CGTGCTCAAG TCCGCGCTTT CGCCCTGGCA ATCGCCTGCG ATATTCACCC TCTTCAGAAT TTGGAAGTGC AGCAGTATCT GCGCGGCAAG CTCAACCTGG AGCAAAGCGC AGTGTCTGAT TGGCTTGGGC ACTGGATCGG CAACGGATTG CTAGCCTGCG AAGCCCTTCT TGGCAGTCAG CCGAGCAATC AGGCCTTTGC ATTTGGAGCG AGCCCGACGC TCGCCGATAT CTGCCTGGCA CCTCAGCTAT ATTCGGCAGA ACGGTTCGGT ATCAGCCTTA ACGACATGCC CCGCCTACGT ACGCTCGGTG CAAGTTATGC AGATCATCCG GCATTCGTTG ACGCACACGC GCACAATCAA CCCGATAGTG AAGAATGGTT TTGGGGGATC TAA
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Protein sequence | MLYYGYWRSS AAWRCRIAFN LKKIAPEFVA VHLTRDGGAQ RTEEFRVINP QKRVPALDLN GAVLTQSLAI IEWLEETIPE PALLPDDPWS RAQVRAFALA IACDIHPLQN LEVQQYLRGK LNLEQSAVSD WLGHWIGNGL LACEALLGSQ PSNQAFAFGA SPTLADICLA PQLYSAERFG ISLNDMPRLR TLGASYADHP AFVDAHAHNQ PDSEEWFWGI
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