| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_5075 |
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| Symbol | |
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| ID | 5195879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009508 |
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| Strand | + |
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| Start bp | 189646 |
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| End bp | 192564 |
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| Gene Length | 2919 bp |
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| Protein Length | 972 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640579506 |
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| Product | transposase Tn3 family protein |
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| Protein accession | YP_001260454 |
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| Protein GI | 148551024 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4644] Transposase and inactivated derivatives, TnpA family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATGTGC CGCTTCGACA ATATCTTGGT TGGGAACGCT TTCCGGCAAA TTTGACCGAA
GCTGAAGTCG CTTCCTTCTT CTCACTTTCC GGGGATCAAC GGCGAGCCGT TTGCCGCCGC
CGCCGCCCGT TGAACCGGTT GGGCCTGGCG CTGCAGATCG GCTTTCTTCG ACTAACGGGG
GCGTCGCTTA ATTCCGTGGA GATGATCCCG CCGCAAGTCC TGGCTCATAT CGGCGCGGAG
CTCGGGATTG CACCACCCCG CCTTGCCTCA ATCCGCGCGC TTTACCGCCG CCGCCGCACG
TTGTTCGAGC ACCACGACGC AGCGAAACAG GCGCTGGGTG TACGCGATCT CACCGAGCAT
GGGGAACGTG CGCTAAATGG CTTTCTGCGG CGTGAGGCCG GCGACAAATT TCTGGTCGAC
GAGTTGGAAC AAGCCGCGCG CGCATGGCTC CATGATCACC ACTATCTCCA ATTGCCCGGG
CGGCGGCTGC GGGGGTCGGC GGCAGCAGCC CGCCGCCAGC ACGATGGCGG ACTGTTGGTG
AGCGCAGTGG CCGCTGTGGG GACAGAACAA GCGAAAGCCT GGCCGCTCAT GCTGTCGGAG
ACGATGACGA ACGGCAAGAC GCGATTGGAA TGGCTTCGAG ACAGTCCTGC GTCCCGTAAA
ACCAAAGGGC TCGCCGACCA CATCGCGAAG ATCGATTTTC TGAAGAAGCT TGGAGCCGAG
AAGCTCGACC TCGGCTTGGC GACCGGAATG CTAAAGGCCC AGGCGCGATC AATGCTCTAC
CGCAAGCCTG CGACACTCAA GCGGATGCGC GGCGAGCGCA AGACCCTCGA GATAGCCTGC
TTTTTACGCC TGCAATTGCT GCGTCTCACA GACGATGGTC TGGGAATGAT CGATTATCGG
ATCGCCGATC TCTGGCGCCA GGCCCGGACC CGCGCCGAGG CGGCGGTTGA GGTCGAACTG
CACCAGCATC AGGCGTTGGT CATGGACTTG GCATGCCTTG TCGATGACGA GAACAGCTCC
GATTCCACCG TGCGCGACCA GATGCGCAGA AGACTGGCGC CGTTCCTGCC GGCCGGCGCG
CACGGTCCGT CCACGAAGGT TGACCGGGTC CGGCGGGAAC TGGCGACAGC AGCCAGAGGT
GCCAGTGAGT TGCTGGGCGC CGCTTCGTCG ATCAGTCTGG ATGTCCCATC GACGCACCCG
CTTGCGCAGG CCCTCGCGAC ACTGGGCCGG CTGGAGGTTT CGGGAGGACG ACAACTGCCG
GAGGGCACAG ACAATCCATT CGGCCGGACA TGGTCGTTCC TCATCGATCA ACCGGACCGC
GAGGCCGCCC TTGGCGGCTA TAGGGCGGCG ACGCTCGTGC TGCTGAAACG CTCAGTGCGC
AATGGCCAGG CCAGCGTCGT CCACAGCCTG GAACATCGTG CCCCTGAGGA CCGTCTGATT
CCAAAAGCGC AATGGCAAAA GGAACGAGCA CGGTACGCGC GAAACCTCGC GGTGTCAGCC
AAGCCGGAGG TGACCATCCG CTGGATCAAG GATGAACTCG CGACGGCCTT GAAAGCGATC
GATGCTGCGG TGTCCAAGGG CGATATCCGG ATCGAAAACG ACCGCTTGGT CGTCCCAAAA
CTCAAGGCGG CGCCGGAAGA TGAAAAGCTC AAGGCCATTC GGCGCGAGCT ATTCGCCGGC
GTCGGAAAGA TCCAGCTACC GGACCTGCTG ATATCCATTG ATGCCACTAC GCATTTTTCC
TGGGTCCTGT TGGGCAGGGC GCCGCGAAGC GAGCATGAAC TCATACTCCT TTACGCGGCC
CTGATAGCCC TGGGCTCCGA TCTGACCGCC GCCGACATGG CGCGCATGAC GCTCAATATT
GAGGCCGACG CTGTCGGTGA GATGATGCGC CGCATCGAGG CGAATGGTCG ATTGCCGGCA
GCCAACCGTG TGGTACTTGA TCATTTCAGG ACGCTCCCGG TCACGAGATT GTGGGGAGGC
GGACTTCAGG CATCAGCCGA CATGATGAGC CTTGATGCAA CCCGTCGTCT TTGGACAGCC
CGCTATGATC CGCGCCGCCG CACGCCGGCG GTCGGAACCT ACACCCATGT GCTCGACCAA
TGGGTGATCC TACACGACCA GGCGGTCGTG CTGAACCGTC GGCAAGCGGG GGCCGCTATC
GAAGGGGCTC TTCGCCACGA ATCCGTCGAC CTCCACCGTG TCGCGGTGGA TACCCATGGC
CACACACATT TCGGCATGGC GCTGGCCAAT CTGGTGGGGT TTGATCTCGC CCCGAGGCTG
GCCGGGATGA ACAAACGCAA GCTGTATCTC CCACGTGGCC TGAATATACC TGCCACCCTT
CGACCGATTG TGAGCGAGAC CGTCTCACTC AGTGCCATCA CCCAGGGCTG GGACCCGCTC
CTGCGGATTG CGGCATCGAC CAAGAGTGGC TGGTGTTCGG CGACCTACGT TCTGGACCGC
TTTGGCAGCG CCGCACGAGG CGATGAAGCA TTTCAGGCAG GAGATGCCTT CGGCAAGCTC
TTGCTTACCC GCTTTCTGGG CGCTTATCTT GGCGATCCGG CGTTCAGAGG GATGAATGAC
GCCCTGCTTA GCCAAGGTGA GTCGGTCCAC ACCCTGCAGC GCGCGATCTA TTCCGGCCCG
ATCGGCGCAC GGCATGGCCG GACGCCAGAG CAGATGGCCG CGATATCGTC AGGCCTGACA
TTGCTTACCA ACGTCATCAT GACGTGGAAC GCGACCCGGA TCGGTGAGGT TCGAGCGCGA
ATGCCGGACA TCTTTCCGGA TCACCACATC AAGCACATCG CCCCCAACGC GCACGAGCAT
ATCAACACCA AGGGCGTCAT CACGATTGAC GTCTCGCTAC ACCGGGACCG GCTCTTGGGC
GCGGGACCGC CAGCGGCCGG GATTAGAAAT GTAATATGA
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| Protein sequence | MDVPLRQYLG WERFPANLTE AEVASFFSLS GDQRRAVCRR RRPLNRLGLA LQIGFLRLTG
ASLNSVEMIP PQVLAHIGAE LGIAPPRLAS IRALYRRRRT LFEHHDAAKQ ALGVRDLTEH
GERALNGFLR REAGDKFLVD ELEQAARAWL HDHHYLQLPG RRLRGSAAAA RRQHDGGLLV
SAVAAVGTEQ AKAWPLMLSE TMTNGKTRLE WLRDSPASRK TKGLADHIAK IDFLKKLGAE
KLDLGLATGM LKAQARSMLY RKPATLKRMR GERKTLEIAC FLRLQLLRLT DDGLGMIDYR
IADLWRQART RAEAAVEVEL HQHQALVMDL ACLVDDENSS DSTVRDQMRR RLAPFLPAGA
HGPSTKVDRV RRELATAARG ASELLGAASS ISLDVPSTHP LAQALATLGR LEVSGGRQLP
EGTDNPFGRT WSFLIDQPDR EAALGGYRAA TLVLLKRSVR NGQASVVHSL EHRAPEDRLI
PKAQWQKERA RYARNLAVSA KPEVTIRWIK DELATALKAI DAAVSKGDIR IENDRLVVPK
LKAAPEDEKL KAIRRELFAG VGKIQLPDLL ISIDATTHFS WVLLGRAPRS EHELILLYAA
LIALGSDLTA ADMARMTLNI EADAVGEMMR RIEANGRLPA ANRVVLDHFR TLPVTRLWGG
GLQASADMMS LDATRRLWTA RYDPRRRTPA VGTYTHVLDQ WVILHDQAVV LNRRQAGAAI
EGALRHESVD LHRVAVDTHG HTHFGMALAN LVGFDLAPRL AGMNKRKLYL PRGLNIPATL
RPIVSETVSL SAITQGWDPL LRIAASTKSG WCSATYVLDR FGSAARGDEA FQAGDAFGKL
LLTRFLGAYL GDPAFRGMND ALLSQGESVH TLQRAIYSGP IGARHGRTPE QMAAISSGLT
LLTNVIMTWN ATRIGEVRAR MPDIFPDHHI KHIAPNAHEH INTKGVITID VSLHRDRLLG
AGPPAAGIRN VI
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