Gene Swit_5060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_5060 
Symbol 
ID5196024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009508 
Strand
Start bp174703 
End bp175152 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content63% 
IMG OID640579492 
ProductMarR family transcriptional regulator 
Protein accessionYP_001260440 
Protein GI148551010 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones62 
Plasmid unclonability p-value0.391119 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATGGACG GCGATCAGGC ATGGCGGCGG CAGAATATGG GGCGTCTGCT CAATCGGGCC 
ATTGCCCGGT TTGAAGGCCG GGTGTTCGAC CTGTTGCATC AGCAGGGCTA TACGGCGGTT
CGCACGAGCC ATATCGGCCT GACACGCAAT CTGGACCTGG ACGGGACTGC GATCACCGAG
CTGGCCCGCC GCGCAGCCAT GACGAAACAG GCGATGGGCG AACTGGTCGT GCAGTGTGAA
GCGATAGGCC TGGTGTTCCG CGAAACGTCT GCGGAAGATG CGCGGGTCAG GATCGTCCGG
TTCACGGCGG AGGGCCGTCA GTGGCTGGAG GCGTTTCGAG CTGCGATCGA ACAGGCCGAA
TCGGAAGCCA GGCAGGGGAT CGGAAGCGCG GCGTTCACGG AGATGATCGG CGCACTGCGG
ACATATCTGG CAGACGGGTG CGAAATCTAG
 
Protein sequence
MMDGDQAWRR QNMGRLLNRA IARFEGRVFD LLHQQGYTAV RTSHIGLTRN LDLDGTAITE 
LARRAAMTKQ AMGELVVQCE AIGLVFRETS AEDARVRIVR FTAEGRQWLE AFRAAIEQAE
SEARQGIGSA AFTEMIGALR TYLADGCEI