Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_5060 |
Symbol | |
ID | 5196024 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009508 |
Strand | - |
Start bp | 174703 |
End bp | 175152 |
Gene Length | 450 bp |
Protein Length | 149 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640579492 |
Product | MarR family transcriptional regulator |
Protein accession | YP_001260440 |
Protein GI | 148551010 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 62 |
Plasmid unclonability p-value | 0.391119 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATGGACG GCGATCAGGC ATGGCGGCGG CAGAATATGG GGCGTCTGCT CAATCGGGCC ATTGCCCGGT TTGAAGGCCG GGTGTTCGAC CTGTTGCATC AGCAGGGCTA TACGGCGGTT CGCACGAGCC ATATCGGCCT GACACGCAAT CTGGACCTGG ACGGGACTGC GATCACCGAG CTGGCCCGCC GCGCAGCCAT GACGAAACAG GCGATGGGCG AACTGGTCGT GCAGTGTGAA GCGATAGGCC TGGTGTTCCG CGAAACGTCT GCGGAAGATG CGCGGGTCAG GATCGTCCGG TTCACGGCGG AGGGCCGTCA GTGGCTGGAG GCGTTTCGAG CTGCGATCGA ACAGGCCGAA TCGGAAGCCA GGCAGGGGAT CGGAAGCGCG GCGTTCACGG AGATGATCGG CGCACTGCGG ACATATCTGG CAGACGGGTG CGAAATCTAG
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Protein sequence | MMDGDQAWRR QNMGRLLNRA IARFEGRVFD LLHQQGYTAV RTSHIGLTRN LDLDGTAITE LARRAAMTKQ AMGELVVQCE AIGLVFRETS AEDARVRIVR FTAEGRQWLE AFRAAIEQAE SEARQGIGSA AFTEMIGALR TYLADGCEI
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