| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_5045 |
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| Symbol | |
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| ID | 5195899 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009508 |
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| Strand | - |
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| Start bp | 157564 |
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| End bp | 159744 |
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| Gene Length | 2181 bp |
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| Protein Length | 726 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640579477 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001260425 |
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| Protein GI | 148550995 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 0.0895856 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTATC ATAAATATTG TATCGCAACG ATGGCTGCGC CTCTCGCGAT GTACGCCGCT
CCGTCCTTCG CACAAGGGCA GGCGGTCGAG CCGCCACAGG AACAGGCAAC GTCCGACACC
CAGGTCGAGG AGATCATCGT CACCGCGCAA CGCCGGGGCG AAAATCTTCA GAATGTGCCG
ATCGCCATCA CCGCCCTGTC GGCGTCGCGT CTGCAGGCGA CAGGCGTCCT GACTGCGCAG
GATCTTTCCA CGGTCACGCC GTCGCTGCAG ATGCCGGCAC AGGCGGGCTA TCTGCTGCCC
CGACTTCGTG GCATCGGCAC GAGCGTCATC GGTCCGGGCA TTGAAAATAC CGTGGCCCTG
TATGTGGACG GTGTCTACCA GGCATCGTCG CCCGCATCGA TATTCTCGCT GACCGGGATC
GAGCGGATCG AGGTGCTCAA GGGGCCGCAG GGGACGTTGT TCGGACGCAA CGCCACCGGC
GGACTGATCC AGATCGTGAC GCGCGAGCCC GAACCCGGTT TCAGCGGAAA CGGGGCGATC
AGCTACGGTA ATTACGACAC GGTCTCTGCC GACGCCTATA TCGCCGGTGG CTCCGACACG
GTCCGTGTTT CGCTTGCCGG GCGCTATGCG CATCAGGGGG ACGGTTTCGG TTACAATTTC
GCCCGTGGCG AAGATGCCAA TACGGTGAGG GACGATCTGG CGCTTCGCGG CAAGATGGTC
TTCCTTCCCG CCGATGGTAC GAAGGTGACT TTCAGCGCGG ACTATGCACG CACAAGGGGC
AGCTATCCAG AAGCCCGCAT GTTCCCCGGC GCTCCCGCGC GCAATGATCC CAATCCGCCG
TCCGGTCCCT TCGACACGAA CAACAACACG CAGTCGATCA AGAGCCTGGA TGCGGGCGGT
GCCAGCCTGC GCGTCGATCA GGATGTCGGC GCCATCGGGT TGACCAGTAT TTCGGCCTAT
CGCCGTTCTA CATTCCATTC CGTCGTGGAT CTCGACCGTA CTCCCGCCAA TCTGGTGTTC
ATCGACAACA CTCAGCAGGA CCGTCAGTTC AGCCAGGAGT TGCAGCTTCA TTCGACAAGG
GGGTCGACGA TCGACTGGCT GGTCGGCGGC TATTATTTCT GGTCGAAAAG CGGCTTCGAG
CCCAGCATCC TGACCAATTA TCCGCCGACC GCTCCGGCGC CACGAACAGT GACGGTTGAC
GGCAATCAGT CGACGGAGTC GCTGGCTGCC TTCGGACAGC TGACGGTTCC GTTGACCGAC
CAGCTTCGGG CGACGGCAGG TCTGCGCTAC ACCACGGAGA AGCGCAGCAT CGACACCGGC
AGCATCGTGG CGCTGATCTC GGGGCCGACG CTGGCGACGG CGGCGCAGGA CGACAGCCGA
CGCTACAACA AGCTGACCTG GCGCGCGGCG CTCGATTATC AGCCGACACC CGACGTGTTG
CTGTATCTGT CCTACAACCG GGGCTTCAAG AGTGGCGGCT TCAACGTCAC CACACCGGGC
GCGGCGCCCT ATGAGCCCGA GGTGTTGGAC GCCTTCGAAT TCGGAGCGAA ACTGGATTTG
TTCGATCGTC GGCTGCGGAT CAATTCGGCG GTCTTCTATT ATGACTATTC CAACATTCAG
GTCGCGTATT TCATCGGCGC TTCGGGCGGC ACGCTTGGTA TCCGCAACGG GTCGTCCGCG
ACGGTCTACG GGGCGGATGT CGACCTTTCC CTGATCCTGG CGCCGGGGTT GACGCTACAG
GGTGGGGCCA GCCTCATTCA TGACCGCTTC GGCGATTTTC CCAACGCGGT GATCAACACC
CCGCTTCCGG GCGGCGGCAA CGCCAGCGGC GTTTTCCAGG CCAAGGGGAA CCGGCTGCCG
TTCACGTCGG ATTTTTCGGG AAACATCGGG CTGGACTATG CGCGTGAGCT GTCTTCCGGA
AAGCTGACCG CCAACGTCAC GCTCTATTAT AATGACGGCT ATTATCCGGA AGCAGATAAT
ATCCGGCGCG TCGACGGCTA CGCCAAGCTT AACGCATCTT TGGGATGGCG GTTCGGCGAA
AGCGGCGTGG GCGTACGCAT CTGGGGGCGC AACCTGACCA ACAAGGCCAT TCCCACGTTC
ATCGGCTCCG TCGCCGCCGG TACGGGCATC ACCTACGAGC CGCCGCGCAC CTATGGCGCG
TCGCTGACCG TGGACTTTTG A
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| Protein sequence | MNYHKYCIAT MAAPLAMYAA PSFAQGQAVE PPQEQATSDT QVEEIIVTAQ RRGENLQNVP
IAITALSASR LQATGVLTAQ DLSTVTPSLQ MPAQAGYLLP RLRGIGTSVI GPGIENTVAL
YVDGVYQASS PASIFSLTGI ERIEVLKGPQ GTLFGRNATG GLIQIVTREP EPGFSGNGAI
SYGNYDTVSA DAYIAGGSDT VRVSLAGRYA HQGDGFGYNF ARGEDANTVR DDLALRGKMV
FLPADGTKVT FSADYARTRG SYPEARMFPG APARNDPNPP SGPFDTNNNT QSIKSLDAGG
ASLRVDQDVG AIGLTSISAY RRSTFHSVVD LDRTPANLVF IDNTQQDRQF SQELQLHSTR
GSTIDWLVGG YYFWSKSGFE PSILTNYPPT APAPRTVTVD GNQSTESLAA FGQLTVPLTD
QLRATAGLRY TTEKRSIDTG SIVALISGPT LATAAQDDSR RYNKLTWRAA LDYQPTPDVL
LYLSYNRGFK SGGFNVTTPG AAPYEPEVLD AFEFGAKLDL FDRRLRINSA VFYYDYSNIQ
VAYFIGASGG TLGIRNGSSA TVYGADVDLS LILAPGLTLQ GGASLIHDRF GDFPNAVINT
PLPGGGNASG VFQAKGNRLP FTSDFSGNIG LDYARELSSG KLTANVTLYY NDGYYPEADN
IRRVDGYAKL NASLGWRFGE SGVGVRIWGR NLTNKAIPTF IGSVAAGTGI TYEPPRTYGA
SLTVDF
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