| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4922 |
|---|
| Symbol | |
|---|
| ID | 5195975 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009508 |
|---|
| Strand | - |
|---|
| Start bp | 34834 |
|---|
| End bp | 35550 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640579361 |
|---|
| Product | pyruvate, phosphate dikinase |
|---|
| Protein accession | YP_001260309 |
|---|
| Protein GI | 148550879 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0574] Phosphoenolpyruvate synthase/pyruvate phosphate dikinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 56 |
|---|
| Plasmid unclonability p-value | 0.287654 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 0.875905 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGACGA AAAGCGTATT CCGCTTCGGC GGTGGAGAGC GCTGCAGTGA TCCACGCAGC
CGCGACAAGA CCATCGTCGG CGGCAAGGGC TCAAACCTCG CGGAAATGGC CGGCATCGGC
CTACCTGTCC CCCCCGGCTT TACCATTACC ACCGAGGAAT GCGGCCGCTA CCTGAAGGAA
TGCGCCAACT TCTCCGATTC GCTCCACGCC GAAGTCGCCG CCGCGCTCGC CCACATCGAA
ACGGCCGTCG GCAAGAAGTT TGGCGACGCG TCCGATCCGC TGCTCGTCTC GGTACGCTCC
GGCGCCCGCG TCTCGATGCC CGGCATGATG GACACCGTGC TCAACCTCGG CCTCAACGAT
CAGACCGTGC TCGGCCTCGC GAAAACCTCG GGCGACGACC GCTTTGCCTG GGACTCCTAT
CGCCGCTTCA TCCAGATGTA TTCCGACGTC GTCCTCGGCC TCGATCACCA CCTGTTCGAG
GAAGCGCTCG AAATCATCAA GGAACATTTT GGCTATACCA ATGACCTAGA AATGACCGCA
CAGGACTGGC AAGCACTTGT TCAATGCTAC AAGAAGCTTG TTGAGGACAC TCATGGCCAG
CCCTTCCCCG CCGATGCCTA CTTAGGCAGG GCGCCGGCGA TCATCCAACA GCGTGAAAGG
ATCAAGCGAC AGACCTTCGA ACATCGGCGC TTGCAACACC GCAAGCTCGC CGACTAA
|
|---|
| Protein sequence | MTTKSVFRFG GGERCSDPRS RDKTIVGGKG SNLAEMAGIG LPVPPGFTIT TEECGRYLKE
CANFSDSLHA EVAAALAHIE TAVGKKFGDA SDPLLVSVRS GARVSMPGMM DTVLNLGLND
QTVLGLAKTS GDDRFAWDSY RRFIQMYSDV VLGLDHHLFE EALEIIKEHF GYTNDLEMTA
QDWQALVQCY KKLVEDTHGQ PFPADAYLGR APAIIQQRER IKRQTFEHRR LQHRKLAD
|
|---|
| |