| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4852 |
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| Symbol | |
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| ID | 5199255 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 5343027 |
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| End bp | 5345345 |
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| Gene Length | 2319 bp |
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| Protein Length | 772 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640584409 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001265327 |
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| Protein GI | 148557745 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTGTATC GAATATTGAT CTGTTCCAGT CTTCTCTCGC TTTCGATTGC CCAGGCGCAG
GCGGCCGAGG TTGCCGACAT GGCCGCCGCC GACTCCGCCG ACGGCGGCGC GGAGATCATC
GTCACCGCGC AGAAGCGCGA GCAGCGGATC ACCGACGTGC CGATGTCGAT CAGCGCCTAT
GGCGCGCAGT TCCTCGAACA GGTCGGCGGA ACCGAGCTGT CGAAGGTGTC GGCGATCACG
CCGGGCTTCG TCATCCAGTT GCAGGACAAG TTCGCCCCCG GCTTCTCGGT GCGCGGCATC
ACCTCCAACG ATTTCTCGCC GCAGAGCGAA TTGCGCGTCG CGGTGTTCCA GGACGGCGTG
CCCGCGTCGC AGGCGACCGC CTCCTATGGC GAGATGTTCG ACGTCGACCG GGTCGAGGTC
GAGAAGGGCC CGCAATCCAC CCTGCATGGC CGCTCGGCGC TCAACGGCGG CGTCTCGATC
TTCCAGAAGC GGCCGACCGA CGATCTGAGC TTCGAGCTCA AGGGCGGGCT GGGGACCTAT
GACTACAAGC ATGTCCAGGG GATCGCGAAC ATTCCCCTGT CGGACGCGGT CGGCGTGCGC
TTCGGCGCGA TGCTGCGCAA GCGGGACGGC TTCGTGAAGG ATGTCGACGG GCAGGGGAGC
TACAACGCGC TCGATGCCCA GGCCTATCGC TTCGCGGCGA AGTTCGAGCC GAGCAGCGAT
TTCAAGTTCA ACCTCATCGC GACCTATGAC GTCGACGACA CCGACGGCGG CGTTCCCTTC
AAGTCGCGCA CCTTCGTCCC GCTCGACCAG GCGACCGGGG CGGTCGTCGG CGACCTCAAT
TTCTGGACGC CCACCCATCT GAACAGCTTC GGGACGATCC CGACCGCCTA TTTCCATCGC
GAGATACTGG GGATCAGCGG CACGGCCGAC TGGACGATCA ACGATCGCTT CTCGATCACC
TCGATCACCG GCTATCGCTG GTTCGACGCC TGCCAGAGCG GCGACAATGA CGGCACGCCG
ACCAACATCA TCGCCTATGA GCAGTGCAAT TACGGCAAGC AATATTCGCA GGAGACCCGG
CTCAACTTCC AGGATGTCGG GCCATTCGAG GGCTTCATCG GCGGCAGCGC CTTCAAGGCG
AAGAACGGGA TGAACTTCGA CCTGGGTTAT GACGAGCGGG CGATGGCGCT GATGTTCTCG
GGCACCCTGC AGAAATTCGC GCCGCGCGGG CTGACCAACA ACGAGATCAA CGCGCTGCTC
GGGCCGGCCG CCGCCGGGCT GAAGCCCTTC ACGCTCGACC GGCAGCTCAC CAAGGCCGAC
ATCACCACCT TCGACATCTT CGGCGACGTC ACCGCGCATC TCGGCGAGCG CCTCGAGGTC
TTCGCCGGCG GCCGCATCAC CTGGGACAAG AAGAAGGCGT CGCTTCAGGG GCTGACCCCG
CTCGGGCCGT CGAACCTGAC CGGCGCGGGC ATCCTGCTCC AGCCGACCCC CGGCGGCGCC
GTCCTGCGCG GCGAGAACAG CTCGACGATC GTGACCGGCC GCGGCGGCGC CCGCTTCAAG
CTGACGCCCG ACGTCAACCT GTTCGTCGCC TATGGCGTCG GCAAGCGGCC CGAGACCCTG
CAGATCAACC CGACCCGGCC GGCCGACCTG ATCCCCGAGG AACGGCTCGA TTCGGTCGAG
GGCGGCGTCA AGTTCCGCCT GTTCGACGGG CGCGTGGTCG GCGACGCCAC GCTGTTCCAT
TATGAATATG AGAATTTCCA GACCCAGGGC CTCGTCAACG GCCGGCTGGC GACGGTCAAC
GCCGGCAAGG CCGACGCGAC GGGCTTCGAG ACCCAGCTCA ACGTCGCGCT GACCCGCGAG
CTGTCGATCT TCGGCAGCTA TGGCTACAAC AAGGCGCGTC TCCGGTCGGG CGCGTTCAAG
GGCAATCGCT TCCGCAACAG CCCCGATCAC AAATTCGCGG TTGGTGCCGA CGTCACCCTG
CCGGTGGCGG GCGGATCGGT CAGCTTCGCG CCGCTCTATA GCTGGCAGTC GAAGATGTAC
TTCTTCGACG ACAACGACCG GCTCGACCTG CAACAGCGCG TTCCGGTCGC CCTGTCCGAC
ATGGTGGTGG ACGAATTCCA GGGCGGCTTC GGCCTGCTCA GCGCCCGGCT CACCTTCAAG
GGCGCCGACG ATCGCTGGAG CTTCGCGCTG GTCGGCGACA ATCTGACCGA CAAGAAGTTC
CTCGTCGATG CCGGCAATAC CGGCGACTAT TTCGGCATCC CCACCTTCAT CGCCGGTTCG
CGCCGCACCT ATCGCGCCGA ATTCGGCATC AAATTCTGA
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| Protein sequence | MLYRILICSS LLSLSIAQAQ AAEVADMAAA DSADGGAEII VTAQKREQRI TDVPMSISAY
GAQFLEQVGG TELSKVSAIT PGFVIQLQDK FAPGFSVRGI TSNDFSPQSE LRVAVFQDGV
PASQATASYG EMFDVDRVEV EKGPQSTLHG RSALNGGVSI FQKRPTDDLS FELKGGLGTY
DYKHVQGIAN IPLSDAVGVR FGAMLRKRDG FVKDVDGQGS YNALDAQAYR FAAKFEPSSD
FKFNLIATYD VDDTDGGVPF KSRTFVPLDQ ATGAVVGDLN FWTPTHLNSF GTIPTAYFHR
EILGISGTAD WTINDRFSIT SITGYRWFDA CQSGDNDGTP TNIIAYEQCN YGKQYSQETR
LNFQDVGPFE GFIGGSAFKA KNGMNFDLGY DERAMALMFS GTLQKFAPRG LTNNEINALL
GPAAAGLKPF TLDRQLTKAD ITTFDIFGDV TAHLGERLEV FAGGRITWDK KKASLQGLTP
LGPSNLTGAG ILLQPTPGGA VLRGENSSTI VTGRGGARFK LTPDVNLFVA YGVGKRPETL
QINPTRPADL IPEERLDSVE GGVKFRLFDG RVVGDATLFH YEYENFQTQG LVNGRLATVN
AGKADATGFE TQLNVALTRE LSIFGSYGYN KARLRSGAFK GNRFRNSPDH KFAVGADVTL
PVAGGSVSFA PLYSWQSKMY FFDDNDRLDL QQRVPVALSD MVVDEFQGGF GLLSARLTFK
GADDRWSFAL VGDNLTDKKF LVDAGNTGDY FGIPTFIAGS RRTYRAEFGI KF
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