| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4810 |
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| Symbol | |
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| ID | 5200277 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 5296697 |
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| End bp | 5298301 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640584367 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_001265285 |
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| Protein GI | 148557703 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGATGG AAGGTGCCGA GTTCGACTAC ATCGTGGTCG GGGCGGGCTC GGCGGGTAGC
GTGATCGCGG CGCGGTTGAG CGAGCGGGCG GACGTCAGCG TCCTGCTGAT CGAGGCGGGC
GGCAGCGACA ACCGCTTCTG GCTCAAGATC CCGGTCGGCT ACGGACGCAC CATCACCGAT
CCCACGGTGA ACTGGAAGTA CATGACCGAG CCCAATCCGG CGCTCGGCGG CCGCCGCATC
TACTGGCCGC GCGGCAAGAC GCTGGGCGGG TCGAGCAGCA TCAACGGCCT GATCTACATC
CGCGGCCAGG CGCAGGACTA CGACCAGTGG CGCCAGCTCG GCAACGAGGG CTGGGGCTAT
GACGACGTGC TGCCCTTCTT CCGCCGCGCC GAAGACCAGG AGAATGGCGA GGATCGCTAT
CATGGCGTCG GCGGCCCGCT GAGCGTCACC AACCTGGTCG AGCGGAACCC GCTGTGCGAC
GCGCTGATCG GCAGCGCGGA GGCCAACGGC GTCCCGCACA ATCCCGACTT CAACGGCGCC
GCGCAGGAGG GCGTCGGCTA TTATCAGGCG ACGATCCGCA ACGGTGCGCG CTGCTCGACC
TCGGTCGCCT ATCTGAACCC GGTCAAGCGC CGCCCGAACC TGACGATCCT GACCGAGGCC
CAGGCCGAGA AGGTCCTGTT CGACGGCCCG CGCGCGAACG GCCTGCGCGT GCGGCGACGC
GGCGAGAGCT TCACGGTCAG GAGCCGGCGC GAGCTGATCC TGTCGGGCGG CTCGGTCAAC
TCGCCCCAGC TCCTGCTGCT GTCGGGCGTC GGCCCGGCGG CCGAGCTGAA GGCGCTGGGG
ATCGACCCGG TCCACGACCT GCCCGGCGTC GGCGAGAACC TCCAGGACCA TTATGGCGGG
CAGATCACCT GGCGCTGCAA CCAGCCGATC ACGATGAACG ACATCATGCT CAGCAAGCGC
AAGCAGCTTT TCGCCGGGCT GACCTGGCTG TTGTTCCGCG ACGGTCCGCT GTCGGTGCCG
GCGGGGCAGG CGGGGCTGTT CGCCCGCGTC TCGCCGGGGG CGGCGACGCC CGACGTCCAG
TTCCTGTTCC AGACCTTCAG CGGCGGCTAT TATGAGGACG GGCTGTTCAA ATTCTCGGGC
TTCGCCAACT TCATCTGCCC GGTCCGGCCG CAGAGCCGCG GGCGGCTGAG CCTGGCCAGC
GCCGACCCGT TCGAGGCGCC GCGCCTCGCG CCCAATTATT TCGCGCATGA GGCCGACCGG
CGAATCGCGG TCGAGGGGCT CAAGCTTGCG CGCCGGATCG CGGCGACCCC GCCGCTCGCC
GACTTCATCT CGGCCGAGCA TCTGCCCGGC GGCGACGTGC GCTCCGACGA CGAGATCGAG
GCCTATTTCC GCGAGACCGG CGGCTGCGTC TCGCACCAGG TCGGGACCTG CAAGATGGGC
AAGGACCGGA TGGCGGTGGT GGACAGCCGG CTGCGCGTCC ACGGCGTTCA GGGGCTGCGC
GTCGCCGATG CGTCGATCAT GCCGACGCTG ATATCGGGCA ACACCAACGC GGCGAGCATC
ATGATCGGCG AGAAGGCGGC GCAGATGATC GCGGACGACG CCTGA
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| Protein sequence | MQMEGAEFDY IVVGAGSAGS VIAARLSERA DVSVLLIEAG GSDNRFWLKI PVGYGRTITD
PTVNWKYMTE PNPALGGRRI YWPRGKTLGG SSSINGLIYI RGQAQDYDQW RQLGNEGWGY
DDVLPFFRRA EDQENGEDRY HGVGGPLSVT NLVERNPLCD ALIGSAEANG VPHNPDFNGA
AQEGVGYYQA TIRNGARCST SVAYLNPVKR RPNLTILTEA QAEKVLFDGP RANGLRVRRR
GESFTVRSRR ELILSGGSVN SPQLLLLSGV GPAAELKALG IDPVHDLPGV GENLQDHYGG
QITWRCNQPI TMNDIMLSKR KQLFAGLTWL LFRDGPLSVP AGQAGLFARV SPGAATPDVQ
FLFQTFSGGY YEDGLFKFSG FANFICPVRP QSRGRLSLAS ADPFEAPRLA PNYFAHEADR
RIAVEGLKLA RRIAATPPLA DFISAEHLPG GDVRSDDEIE AYFRETGGCV SHQVGTCKMG
KDRMAVVDSR LRVHGVQGLR VADASIMPTL ISGNTNAASI MIGEKAAQMI ADDA
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