| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4476 |
|---|
| Symbol | |
|---|
| ID | 5196676 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 4920391 |
|---|
| End bp | 4921083 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640584029 |
|---|
| Product | DNA repair protein RadC |
|---|
| Protein accession | YP_001264952 |
|---|
| Protein GI | 148557370 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2003] DNA repair proteins |
|---|
| TIGRFAM ID | [TIGR00608] DNA repair protein radc |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.352364 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGACCA CTTCCACCGA TCCCGCCACC GACGCCAGCG GCCATCGCGC GCGGTTGCGG
CGGCGGCTGG CCGAAGGCGG CCCCGACGCG CTGCTCGATC ATGAGCTGAT CGAATATCTC
CTCGCCCTCG CCATTCCCCG GCGCGACACC AAGCCGATGG CCCGCGCACT GCTTGCGGAG
TTCGGAGGGC TCGGCCCGCT ATTGTCCGCA GACCCGGAAT CGCTTGCGCG CGCGGGGCTG
AGCGAAGGCG TGGTCGCGGC CCTCAAGATC GCCGAGGCGT CGGCGTTGCG CCTGCTCCGC
AGCAAGGTGC AGGACCGGCC GATCCTCTCC GACTGGCAAG CGCTGGCCGA TTATCTGCGC
GCCGACATGG CGCACCGCGC CGTCGAACGG GTCCGCGTCC TGCATCTGAA CAGCAAGAAC
GTCCTGGTCC GCGATGAGCT CGTCTCGGAA GGCTCGGTCG ACCAGGCCGC CGTCTATGTC
CGCGAGATCA TCAGGCGCGC CCTGGAGCTC GGTTCGGCCG CACTGATCAT CGTCCACAAT
CATCCATCGG GCGATCCCCA GCCAAGCCGA CAGGATGTCG AGCTGACCCG GGAGCTCATC
GCCGCGGCCA AGCCGCTCGG CATCGCCATC CATGATCATG TCGTGGTGGG GACCAGAGGC
CAGGCCAGCC TGCGCGCGCT CGGGCTGATC TGA
|
|---|
| Protein sequence | MTTTSTDPAT DASGHRARLR RRLAEGGPDA LLDHELIEYL LALAIPRRDT KPMARALLAE
FGGLGPLLSA DPESLARAGL SEGVVAALKI AEASALRLLR SKVQDRPILS DWQALADYLR
ADMAHRAVER VRVLHLNSKN VLVRDELVSE GSVDQAAVYV REIIRRALEL GSAALIIVHN
HPSGDPQPSR QDVELTRELI AAAKPLGIAI HDHVVVGTRG QASLRALGLI
|
|---|
| |