Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_4443 |
Symbol | |
ID | 5199989 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 4890161 |
End bp | 4892179 |
Gene Length | 2019 bp |
Protein Length | 672 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640583995 |
Product | hypothetical protein |
Protein accession | YP_001264919 |
Protein GI | 148557337 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGACGATA TCGTACGCGA GGCGATCGAC GCCTTCGCGG CCGCGGAGGC GCATGAGAGC GACAATCGCG CGGCGGCGCT CGACGACCTG CGCTTCGCGC GGCTGGGCGG GGCCTGGCAA TGGCCCGACA CGGTCCGGCG GCAGCGCGAG GCGGAGGGGC GGCCGTGCCT GACCATCAAC AAGATGCCGG CCTTCATCCG CCAGGTCGTC AACGACAGCC GGCAGAACAA GCCGGCGATC TCGGTCCATC CGGTCGAGCG CGGCGACATG AAGACGGCCG AGGTGATGAG CGGCCTGATC CGCAACATCG AGACGATGTC CAACGCCGAC ATCGCCTATG ACACGGCGGT CGACTGCTCG GCGACGATGG GCATCGGCTA TATCCGCGTC AACCTGGACT GGGCGGCCGA CGACGGCTTC GACAAGGACA TCGTCATCCG GCCGGTGCCG AACCCGTTCG CCGTCTATGG CGACCCCTTT TCGCAGGCGG CCGACAGCTC GGACTGGATG ACGGCCTTCA TCGTCGAGCA GATGAGCGAG GCCCAGTTCG CCCGGCGCTT TCCCGGCGCG GACCCGATCG ACTTCGCCAG CGCGGCGTGG AGCGGCACTG GCGGCTGGGC GGACGGGCAG GAGAAGAGCG TCCGCGTCGC CGAATATTGG AAGCGCGAGG AGGTGGTGCG CCAGCTCGTC CAATATGCGC CGGCGGGCGG GGGCGGGGTG GCGATCGCCC ATGTCGACGA ACTGCCGCGG CTGAAGGCGA TGCTGGGGCC GATCGAGGTG ATCGGCCAGC CCCGGCCGGT CAAGTCGTTC AAGGTGACGC AGCATGTGGT GAACGCGGTC GAGCGCCTGT CGAGCGAGGA CTGGGCGGGG CGCTACATCC CGATCGTGCC GGTCTATGGC GAGGAGGTGA ACGTCGAGGG GCGGCGGCAC TTCCGGTCGC TGATCCGCGA CGCGCGCGAT CCACAGCAGA TGTTCAACTA TTGGCGGACG ATGGCGACCG AGCTGGTCGC GCTGGCTCCC AAGGCGCCGT GGGTGGGGCG CAAGGGCGCC TTCGCCTCCG ATCCGCGCTG GACCACGGCG AACAACGCGA CGCACGCCTT CCTGGAATAT GACGGGCCCG AGCCGCCGAT GCGCCAGCCC TTCGCGGGGG TGCCGGCGGG CGAGCTGCAG GCGGCGATGA ACGCGGCCGA CGACATGAAG GCGGTGATGG GCCTGTACGA CGCCTCGCTC GGCGCGCGAT CGAACGAGAC GAGCGGGCGG GCGATCCTGG CGCGGCAGCG CGAGGGGGAT ACGTCGACCT TCCACTTCAT CGACAATCTC AACCGCGCGA TCCGCCATAC CGGCCGCATC CTGATCGACC TGATCCCCAA GGTGTACAAC AGCGACCGGA TGATCCGGGT GCTGGGCCAG GACGGCAAGG CCGATCTGGT GCGGATCACC GACCCGCAGG GCGTGCCCGA TCCGGCCGCC GACATCTACA ACCTGACGAT CGGCAAATAT GACCTGACGG TGAAATCGGG CCCGTCCTAT TCGACCCAGC GCGAGGAGGC GGCGACGATG CTGACCGAGC TCGTTCGCGC CAATCCGGCC AGCGTTGGGA TATTGGGCGA CCTGATCGTG GAGAATCTGG ACCTGCCCGG CGGCGACAAG GTGGTGAAGC GGCTCCAGGC CGTGCTGCCC GAGCCGGTCC GCCAGGCAGA GCAGGGCGCG AACCCCGAGG CGCAGGCGGC GCAGCACCAG GCGCAGCAGC TTGCCCAAGC GCTCCAGCAG CTCGGCGCGC AGCTCCAGGC GGCGCAGGCC GACAAGGGGC GCGACGACCG CAAGCTCGAC ATCGACGCCT ATAAGGCGGT GACGGACAGG CTCGCCTCGG TCGCGACGAT GGTCACGCCC GACATGGTGC GGGTGATGGT GATCGAGACG TTGCAGGACG CCCAGCAGAC GGCGGCGCGG GTGCCGGAGG CGGCGGTGGG GCCGGTGGAG GGACCGGTGG CGCCGGGGGT GGCGGCGCCG CAGGGCTGA
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Protein sequence | MDDIVREAID AFAAAEAHES DNRAAALDDL RFARLGGAWQ WPDTVRRQRE AEGRPCLTIN KMPAFIRQVV NDSRQNKPAI SVHPVERGDM KTAEVMSGLI RNIETMSNAD IAYDTAVDCS ATMGIGYIRV NLDWAADDGF DKDIVIRPVP NPFAVYGDPF SQAADSSDWM TAFIVEQMSE AQFARRFPGA DPIDFASAAW SGTGGWADGQ EKSVRVAEYW KREEVVRQLV QYAPAGGGGV AIAHVDELPR LKAMLGPIEV IGQPRPVKSF KVTQHVVNAV ERLSSEDWAG RYIPIVPVYG EEVNVEGRRH FRSLIRDARD PQQMFNYWRT MATELVALAP KAPWVGRKGA FASDPRWTTA NNATHAFLEY DGPEPPMRQP FAGVPAGELQ AAMNAADDMK AVMGLYDASL GARSNETSGR AILARQREGD TSTFHFIDNL NRAIRHTGRI LIDLIPKVYN SDRMIRVLGQ DGKADLVRIT DPQGVPDPAA DIYNLTIGKY DLTVKSGPSY STQREEAATM LTELVRANPA SVGILGDLIV ENLDLPGGDK VVKRLQAVLP EPVRQAEQGA NPEAQAAQHQ AQQLAQALQQ LGAQLQAAQA DKGRDDRKLD IDAYKAVTDR LASVATMVTP DMVRVMVIET LQDAQQTAAR VPEAAVGPVE GPVAPGVAAP QG
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