Gene Swit_4443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4443 
Symbol 
ID5199989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4890161 
End bp4892179 
Gene Length2019 bp 
Protein Length672 aa 
Translation table11 
GC content69% 
IMG OID640583995 
Producthypothetical protein 
Protein accessionYP_001264919 
Protein GI148557337 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACGATA TCGTACGCGA GGCGATCGAC GCCTTCGCGG CCGCGGAGGC GCATGAGAGC 
GACAATCGCG CGGCGGCGCT CGACGACCTG CGCTTCGCGC GGCTGGGCGG GGCCTGGCAA
TGGCCCGACA CGGTCCGGCG GCAGCGCGAG GCGGAGGGGC GGCCGTGCCT GACCATCAAC
AAGATGCCGG CCTTCATCCG CCAGGTCGTC AACGACAGCC GGCAGAACAA GCCGGCGATC
TCGGTCCATC CGGTCGAGCG CGGCGACATG AAGACGGCCG AGGTGATGAG CGGCCTGATC
CGCAACATCG AGACGATGTC CAACGCCGAC ATCGCCTATG ACACGGCGGT CGACTGCTCG
GCGACGATGG GCATCGGCTA TATCCGCGTC AACCTGGACT GGGCGGCCGA CGACGGCTTC
GACAAGGACA TCGTCATCCG GCCGGTGCCG AACCCGTTCG CCGTCTATGG CGACCCCTTT
TCGCAGGCGG CCGACAGCTC GGACTGGATG ACGGCCTTCA TCGTCGAGCA GATGAGCGAG
GCCCAGTTCG CCCGGCGCTT TCCCGGCGCG GACCCGATCG ACTTCGCCAG CGCGGCGTGG
AGCGGCACTG GCGGCTGGGC GGACGGGCAG GAGAAGAGCG TCCGCGTCGC CGAATATTGG
AAGCGCGAGG AGGTGGTGCG CCAGCTCGTC CAATATGCGC CGGCGGGCGG GGGCGGGGTG
GCGATCGCCC ATGTCGACGA ACTGCCGCGG CTGAAGGCGA TGCTGGGGCC GATCGAGGTG
ATCGGCCAGC CCCGGCCGGT CAAGTCGTTC AAGGTGACGC AGCATGTGGT GAACGCGGTC
GAGCGCCTGT CGAGCGAGGA CTGGGCGGGG CGCTACATCC CGATCGTGCC GGTCTATGGC
GAGGAGGTGA ACGTCGAGGG GCGGCGGCAC TTCCGGTCGC TGATCCGCGA CGCGCGCGAT
CCACAGCAGA TGTTCAACTA TTGGCGGACG ATGGCGACCG AGCTGGTCGC GCTGGCTCCC
AAGGCGCCGT GGGTGGGGCG CAAGGGCGCC TTCGCCTCCG ATCCGCGCTG GACCACGGCG
AACAACGCGA CGCACGCCTT CCTGGAATAT GACGGGCCCG AGCCGCCGAT GCGCCAGCCC
TTCGCGGGGG TGCCGGCGGG CGAGCTGCAG GCGGCGATGA ACGCGGCCGA CGACATGAAG
GCGGTGATGG GCCTGTACGA CGCCTCGCTC GGCGCGCGAT CGAACGAGAC GAGCGGGCGG
GCGATCCTGG CGCGGCAGCG CGAGGGGGAT ACGTCGACCT TCCACTTCAT CGACAATCTC
AACCGCGCGA TCCGCCATAC CGGCCGCATC CTGATCGACC TGATCCCCAA GGTGTACAAC
AGCGACCGGA TGATCCGGGT GCTGGGCCAG GACGGCAAGG CCGATCTGGT GCGGATCACC
GACCCGCAGG GCGTGCCCGA TCCGGCCGCC GACATCTACA ACCTGACGAT CGGCAAATAT
GACCTGACGG TGAAATCGGG CCCGTCCTAT TCGACCCAGC GCGAGGAGGC GGCGACGATG
CTGACCGAGC TCGTTCGCGC CAATCCGGCC AGCGTTGGGA TATTGGGCGA CCTGATCGTG
GAGAATCTGG ACCTGCCCGG CGGCGACAAG GTGGTGAAGC GGCTCCAGGC CGTGCTGCCC
GAGCCGGTCC GCCAGGCAGA GCAGGGCGCG AACCCCGAGG CGCAGGCGGC GCAGCACCAG
GCGCAGCAGC TTGCCCAAGC GCTCCAGCAG CTCGGCGCGC AGCTCCAGGC GGCGCAGGCC
GACAAGGGGC GCGACGACCG CAAGCTCGAC ATCGACGCCT ATAAGGCGGT GACGGACAGG
CTCGCCTCGG TCGCGACGAT GGTCACGCCC GACATGGTGC GGGTGATGGT GATCGAGACG
TTGCAGGACG CCCAGCAGAC GGCGGCGCGG GTGCCGGAGG CGGCGGTGGG GCCGGTGGAG
GGACCGGTGG CGCCGGGGGT GGCGGCGCCG CAGGGCTGA
 
Protein sequence
MDDIVREAID AFAAAEAHES DNRAAALDDL RFARLGGAWQ WPDTVRRQRE AEGRPCLTIN 
KMPAFIRQVV NDSRQNKPAI SVHPVERGDM KTAEVMSGLI RNIETMSNAD IAYDTAVDCS
ATMGIGYIRV NLDWAADDGF DKDIVIRPVP NPFAVYGDPF SQAADSSDWM TAFIVEQMSE
AQFARRFPGA DPIDFASAAW SGTGGWADGQ EKSVRVAEYW KREEVVRQLV QYAPAGGGGV
AIAHVDELPR LKAMLGPIEV IGQPRPVKSF KVTQHVVNAV ERLSSEDWAG RYIPIVPVYG
EEVNVEGRRH FRSLIRDARD PQQMFNYWRT MATELVALAP KAPWVGRKGA FASDPRWTTA
NNATHAFLEY DGPEPPMRQP FAGVPAGELQ AAMNAADDMK AVMGLYDASL GARSNETSGR
AILARQREGD TSTFHFIDNL NRAIRHTGRI LIDLIPKVYN SDRMIRVLGQ DGKADLVRIT
DPQGVPDPAA DIYNLTIGKY DLTVKSGPSY STQREEAATM LTELVRANPA SVGILGDLIV
ENLDLPGGDK VVKRLQAVLP EPVRQAEQGA NPEAQAAQHQ AQQLAQALQQ LGAQLQAAQA
DKGRDDRKLD IDAYKAVTDR LASVATMVTP DMVRVMVIET LQDAQQTAAR VPEAAVGPVE
GPVAPGVAAP QG