Gene Swit_4402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4402 
Symbol 
ID5198838 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4852340 
End bp4853275 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content70% 
IMG OID640583954 
Producthypothetical protein 
Protein accessionYP_001264878 
Protein GI148557296 
COG category[S] Function unknown 
COG ID[COG2354] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.976692 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTCGG GACTGGTCGC ATTGCTGGAC GATATCGCGG GGCTGACCAA GCTCGCCGCG 
GCCTCGCTCG ACGATGTCGG CGCGGCGGCG GGCAAGGCCG GCACCAAGGC GGTCGGCGTC
GTGGTCGACG ATGCCGCGGT CACGCCGCGC TACGTCACCG GCCTGACGCC CGATCGCGAG
CTTCCGATCA TCGCGCGGAT TGCGGTCGGA TCGCTCCGCA ACAAGCTGCT CATCCTGCTG
CCCGCGGCGC TGCTGCTCAG CGCCTTCGCG CCCTGGGCGG TGACGCCGCT GCTGATGCTC
GGCGGCGCCT TCCTCTGCTT CGAAGGGGCG GAGAAGGTGA TCGAGGCACT GGGCGGCCAT
CATCCGGTCG AGGAGCATGT CGCCGCCACC GACCCGGCCA CGCTGGAGAA GGAACAGATA
TCCGGGGCGA TCCGCACCGA CCTGATCCTG TCGGCCGAGA TCATGGCGAT CGCGCTGGCC
GAGGTGTCGA GCCAGACGAT CCCGATGCAG GCGATCGTCC TCGCCGCGGT CGGCGTCGCG
ATCACCGCCG GCGTCTACGG CGTCGTGGGA CTGATCGTGA AGATGGACGA TATCGGCCTG
CACCTCGCCC GCAAGCCGGC GACGCGCACG CTGGGCTGCG CGCTGGTCAA GGGCATGCCG
GTGGTGATGC GCTGGCTGTC GATCATCGGC ACCGCCGCGA TGATCTGGGT CGGCGGCGGC
ATCCTGGTCC ACGGCCTCGA GGTGCTCGGC TTCCCCGCTC CCGCCCATTT CCTCCACCAT
CTCAGCGAAG CCGCCGCCCA TGCCGCCCCG GCGATCGGCG GCATCGTCGG CTGGCTGGTT
ACCGCATTCG GATCGGGCAT CGCCGGTCTC GCGGTCGGCG GGGCGATCGT CCCCATCGTC
CATCTCGCCG GCAAGCTGCG CGGCAAGGGG CACTGA
 
Protein sequence
MASGLVALLD DIAGLTKLAA ASLDDVGAAA GKAGTKAVGV VVDDAAVTPR YVTGLTPDRE 
LPIIARIAVG SLRNKLLILL PAALLLSAFA PWAVTPLLML GGAFLCFEGA EKVIEALGGH
HPVEEHVAAT DPATLEKEQI SGAIRTDLIL SAEIMAIALA EVSSQTIPMQ AIVLAAVGVA
ITAGVYGVVG LIVKMDDIGL HLARKPATRT LGCALVKGMP VVMRWLSIIG TAAMIWVGGG
ILVHGLEVLG FPAPAHFLHH LSEAAAHAAP AIGGIVGWLV TAFGSGIAGL AVGGAIVPIV
HLAGKLRGKG H