Gene Swit_4396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4396 
Symbol 
ID5200363 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4848509 
End bp4849294 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content72% 
IMG OID640583948 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001264872 
Protein GI148557290 
COG category[R] General function prediction only 
COG ID[COG3393] Predicted acetyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.264466 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTTGAGC GTGCCCCGCC CCGCCGTCCT CCAGGGCGGG GCGTCACGCC CCAAAGCCAG 
TCGTCCGGGG GCCATCGCTT GCCATCTTCG CCGTCCAGCG CGTCCATGAG CGCGCATCCG
CTCGATCGTC CGATTTGGGA GGCGCTGGCG GACCGGCATG CGGCCTTCGC GCTGGGCGAT
CCGGGGGCTC GGCGCTACCG GCCCGACATC AGCCCTTTCG CCGCCGCCCG CGACAGCTCG
ATCGAGGCGC AATCGGCATT GACCGGGCTG CTCCCCTCGG ATGGCGCCCT CGTCCTGCTC
GAAGCCGGCC CGATCGCCGT TCCGCCCGGC GCGATCGTCG ACAAGGAGGC GGTGGGGGTC
CAGATGGTCG CCGAAGCACT CCAACCCGCG CGGCCCGATG GCCGGGTCGT GCCGCTCGGC
GATGCCGACG CGCCCGAGAT GCTCGCGCTG GCGACGCTCA CCGAGCCCGG CCCCTTCCTG
CCGAACACCC ATCTTTTCGG CGGCTTCATC GGCATCCGGA TCGACGGACG GCTCGCCGCG
ATGGCGGGCG AGCGGCTGAA GCCGCGCGGC CATTGCGAGG TCAGCGGCGT CTGCACCCAT
CCCGACTTCC GCGGGCAGGG GCTTGCCGGC TTGCTTTCGA CCATCGTCGC CAACCGGATC
GCTGGGCGTG GCGAGGTCCC CTTCCTCCAC GCCTATGCCA GCAATACCGG CGCGATCCGG
CTCTACGAGT CGCTCGGCTT CCGCATCCGC TGCGAGGTTT CGGTCCTCGT CCTGCGGCGG
CCCTAG
 
Protein sequence
MLERAPPRRP PGRGVTPQSQ SSGGHRLPSS PSSASMSAHP LDRPIWEALA DRHAAFALGD 
PGARRYRPDI SPFAAARDSS IEAQSALTGL LPSDGALVLL EAGPIAVPPG AIVDKEAVGV
QMVAEALQPA RPDGRVVPLG DADAPEMLAL ATLTEPGPFL PNTHLFGGFI GIRIDGRLAA
MAGERLKPRG HCEVSGVCTH PDFRGQGLAG LLSTIVANRI AGRGEVPFLH AYASNTGAIR
LYESLGFRIR CEVSVLVLRR P