Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_4359 |
Symbol | |
ID | 5198661 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 4813199 |
End bp | 4814104 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640583913 |
Product | regulatory protein, LuxR |
Protein accession | YP_001264837 |
Protein GI | 148557255 |
COG category | [K] Transcription |
COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACGATC GCCAGGACGG CGCCCTCGGC GCACCCCAAC AAGCCGGCTA TGCACCGGGC CGCCGAGCGA TTAGCATGGC GGGCCAGTCG TTCCACCGGA TCAGGGATTG CGGACGCGCC AGCACGATGA GCGGAAACCC CTCGGCCTTC GACGCGAACG GGATGCAGAT GGCGGCGTTC AGCAGCCTCG TCGTCGGGCT CGAGGCGTCG CGGTCGATGG ACGAGGCGAT GGACGTGCTG CACGGCGCGA TCCTGGAACT GGGCTTTCCA CGGGTCGTCT ATGGCTGCGT GTCGATCGCG CACCTGCCGA GCGGGACCTG GGTGCCTGCG CCGTTGCAGG TGCGCGGCTT TCCCGACCGC TGGGATCGCG ACTGGCCCCG GCACCGCGCG CATGATCCCT ATGCGCACAC CGCCTTCCTG AAGATGGAGA GCACCAACTG GACGGTGGTG CAGAACAATG CCGACTTGCT CGATCCGGCG CAGGTCGACT GCATCAGCTA CATCAACGAC CTGGGGCTCA ACCCGGGGCT GACGGTGCCG CTGTTCATCC CCGGCCATCA TTACGGCTTC ATCACCGCTG TCGGTGATGG CGGACTGGAT GGCTGGGACG CGGCCGCCGA CCGGGCGGGG CCGACGCTGG CGATGATCGC CAATTATTTC GACAATTTCG CGATCCGCCG CTTCGGCGGT CCGCCGAAGG AAAGCCAGAG CCTCAGCAAG CGCGAGCTCG AATGCCTGAC CTGGTCGGCT CGGGGCAAGA CGGTGGAGGA CATCGCCGTC ATCCTCGACC TGTCCGCCGA CACGGTGCGG GTCTACCTCA AGCGGGTCAA CCAGAAGCTC GACGCGGTCA ACCGTTCGCA TGCCGTCGCC AAGGCGATGT GCCTGGGGAT GATCGACATC TCCTGA
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Protein sequence | MHDRQDGALG APQQAGYAPG RRAISMAGQS FHRIRDCGRA STMSGNPSAF DANGMQMAAF SSLVVGLEAS RSMDEAMDVL HGAILELGFP RVVYGCVSIA HLPSGTWVPA PLQVRGFPDR WDRDWPRHRA HDPYAHTAFL KMESTNWTVV QNNADLLDPA QVDCISYIND LGLNPGLTVP LFIPGHHYGF ITAVGDGGLD GWDAAADRAG PTLAMIANYF DNFAIRRFGG PPKESQSLSK RELECLTWSA RGKTVEDIAV ILDLSADTVR VYLKRVNQKL DAVNRSHAVA KAMCLGMIDI S
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