| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4324 |
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| Symbol | |
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| ID | 5199415 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 4767967 |
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| End bp | 4768719 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640583878 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001264802 |
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| Protein GI | 148557220 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGAAA CGGAACCGCG CCGCGCCCTG ATCATGGCCG GCGCATCGGG CATCGGCGCG
ATCCTCGCCG AACGCGCGGT TGCCGCCGGC TATGCGGTGG CGGTGTCCGA TCGCGACCAT
GAGGCGGGCG ACGCGCTCGC CGCCCGGACC GGCTGCCGCT TCCTGCCCTG CGACCTCGGC
GACGAGGCGC GGATATCCGA GGTCGTCGAA ACGGTCGGCG CGGTCGACCT GCTGGTCAAC
AATGGCGGTA TTTCCGGGCC GACCGAGCCG GTCGCGACGC TCGATCCGAC GGCGTGGCGC
CAGGTCCTCG ACATCAACCT GACCGCGCAG TTCCTGACCT GCCACGCGAT GGTCCCGCTG
ATGCTGGCCG CCGGCAAGGG CGGCTGCATC GTCAACATGT CGTCGGTCGC GGCGCGGATC
GGCTATCCCA ACCGCGCCGC CTATGCCGCC TCCAAGGCCG GGGTGCTGGG CCTGACGGCG
GCGCTCGCCC GCGAGGTCGG GCCGCAGGGC ATCAGGGTCA ACGCCGTCCT GCCCGCCACC
ACGCGCGGCG ACCGGATCGA GCGCGTGTTC CACGACTATG CCGAGGCCAA CGATCTGCCG
CTCGACGCCG CCGAGGCCGC CTTCCTGACC CGCCACGCGA CCGGCCGGAT GGTGGAGCCG
GAGGACATCG CCGACACGAT CCTGTTCCTC GCCGGGCCCG CCGGCCGGTC GATCACCGGC
CAGTTCATCG GCGTCGACGG AGGTTTCGAA TGA
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| Protein sequence | MAETEPRRAL IMAGASGIGA ILAERAVAAG YAVAVSDRDH EAGDALAART GCRFLPCDLG
DEARISEVVE TVGAVDLLVN NGGISGPTEP VATLDPTAWR QVLDINLTAQ FLTCHAMVPL
MLAAGKGGCI VNMSSVAARI GYPNRAAYAA SKAGVLGLTA ALAREVGPQG IRVNAVLPAT
TRGDRIERVF HDYAEANDLP LDAAEAAFLT RHATGRMVEP EDIADTILFL AGPAGRSITG
QFIGVDGGFE
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