| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4318 |
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| Symbol | |
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| ID | 5199386 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4759675 |
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| End bp | 4762605 |
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| Gene Length | 2931 bp |
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| Protein Length | 976 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640583872 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001264796 |
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| Protein GI | 148557214 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.965607 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGACGG TTCGTGGAAC ATCCTCCGTT CGGCTCCGCT GCTGGCTGCT GCTCGGCAGC
GCGATGCTCG GTTCGCCCGC TCTCGCGCAG GGCGTCTCGC CCGTGCCCGA CGCTGCGTCG
GCGCCGGCCG AGGACATCGT CGTCACCGGC TCGCGCATCG CCCGCAAGGA CCTGACGTCG
AGCAGCCCGC TGGTCGCGAT CGCGCCGAGC GCGCTCAAGA CCAACGCGTC GGTCACGCTC
GACGACACGC TCACCCGCCT GCCGCAGGTG ACGCCCTCCT ATGGCTCCGG ATCGAACGAC
ACCTCGACCG GCGGCACGAC CACGGTCGCG CTGCGCGGCC TGGGGGCGCA GCGCACCCTG
GTCCTGCTCA ACGGCCGGCG GCTGACGGCG GGCACCTATA CCGGCGCGGT CGACCTCAAC
ATGATCCCGA CCGCGCTGAT CGAGTCGATC GAGGTGATCA CCGGCGGCGC TTCGGCGGCC
TATGGATCGG ACGCGATCGC GGGCGTCATC AACTTCCGCC TCAAGAAGAA TTTCGAGGGC
GTCCAGCTCG ACGGCCAGAC CGGCATCACC AGCCGCGGCG ACGGCTTCAC CTCCAGCCTG
TCGCTGACGG CGGGCGGCAA CTTCGCCGAC GATCGCGGCA ATGCGGTGCT CTCGGTCGAC
TATGCCAAGC GCCGCGGCGT CAGCAACCGT TCGCGGGCCT TCTCGCGCAT CAGCCGCCCG
TCGGGCGCGC TGCCGTTCGG CGTCTATGTG CCGAGCGCGC TCAACCTGCC GGCCGCCGGC
GCGGTCGACG GCGTGTTCGC GGGCTATGGC GTCGCGCCGG GCAGCGTCGG CCCCAACAGC
AACCTGTCGT TCAACGCCAA CGGATCGCTG TTCGCGCCGA CCAGCGGCAT CAACTATGAC
GGCAGCGGCC AGGACATCGT CCGCCTCGGC AACGGTGTCT TCTACAATTC GACCGGGGTC
AGCGGCCTCA CCATCCCGCT CGAGCGCTTC GGCCTGTTCG GCCGCGCCGA ATATGAGGTG
GCCGACGACA TCAACGTCTA TGCCGAAGGC GGCTACCAGC ATTTCACCTC CAGCCTGGTG
TTCGGGCCCG GCTTCAACAC GCTGACGGTG CCGACCACCA ATCCCTTCAT CCCCGACGAC
CTGCGCACCG TGCTGGCGTC GCGGCCGAAC CCGAACGCGT CCTTCTCCGT GCTGCGCCGC
TATGCCGATG TCGGGCAGCG GACGGCCGAC TTCACCACCA ACAGCTATCG CCTGCTCGCC
GGCGTCACCG GCCGGATCGA GGCGATCGAC GGCACGTTCG ACGTGTTCGC CAGCCGTGGC
GAGCAGACCG TCGACCGCCG CGACCACAAC GGCGTCAACC TGACCACGCT GAACGCGCTG
ATCAACGCGG CCGACGGCGG CGCCAGCCAG TGCGCGGGCG GCTATGATCC CTTCGCGCTC
AACGGCGGCG CGGCCTGTGC GACGCTGCTG CGGTCGACCA CGATCCGCAA CACCAAGTTC
AAGCAGAATT ATGTCGAGGC GAACGTCCAG GGCCGCCTCT TCTCCTGGTG GGCAGGCGAC
GTCCGCTTCG CGCTCGGCGC CGACCGCCGT AGCGACAGCT ACGACTTCCA GCCCGACACC
GGCGTCCGCA CCGGTCAGAT ATTGGGGATC GAGGGCGTCG GCGTCCCGGC GGTCAACGGC
AGCGTCACCG TCAAGGAGGT GTTCGGCGAG CTGCTGGTGC CGATCCTGCG CGATCTGCCG
CTGGTCAAGG CGTTCGACGT CACCCTGGGC TACCGCTATT CGGACTATGA CCTGTCGGGC
GGCGTCGACG CCTACCGGAT CGAGGGCGAC TGGCGGGTGA TCGACGCGCT GCGCATCCGC
GGCGGCTTCT CCCGCGCGGT GCGCGCGCCC AACGTCTCCG AACTGTTCAC CCCGCAGAGC
CCGCTGACCC CGATCATCGG CGCGCCGGGC GCGCCGGGGC AGGGCGACCC CTGCGACGTG
CGCAGCGCCT ATCGCACCGG CGCGAACGCG GCGCAGGTCC GCGCCCTCTG TCTGGCGCAG
GGCGTGCCGG GCCAGATCAT CGACAGCTAC ACCTTCAACA ACACCCAACT CGTCGACGGC
GGCATCACCG GCGGCAATCC CAAGCTGAAG CCGGAAAGCG CCAACACCTA CACGATCGGC
GCGGTGCTGA CGCCGCGCCT ACCGTCCTCG ATCCTGTCCA ACCTGTCGCT GTCGGTCGAT
TATTACAGCA TCGACCTGAA GAAGGCGATC GGTGCGATCC CGGGCGCCGC GATCGTCCAG
CAATGCTATA ATCTGGGTGG CGCCAATGCC GGCTATGCGA CCGACAACGT CTATTGTTCG
GCGATCGGCC GTAGCGACCA GACCGGCCAG ATCAACCGGC TGGAATCGTT CAACGTCAAT
CTCGGCCGGA TCAAGACGTC GGGCATCGAC GTGTCGCTGG GCGGCACGAT CAGGCTGGGC
GACGACGCCG GCGCGATCGA CCTGTCGGGC ACGGTCAACT GGACCGAGAA ATATGCCGTC
ACCAACTTCC CGGGGGCGAG GCCCATGGAT CTCGCCGGTT CGATCGGCAG CTCGGCGGGC
AGCAATGCGG GGACGCCGGC GGCCTTCCCC GAATGGCGCG CGCAGGCCAA CCTGACCTAT
CGCAACGGCC CGTTCCAGGT CGGCGTCCAA TATCGCTACA TCGACAAGAT GATCGACGTG
TCGGCGATCG GCATTCCCAA TTCGACCGCG ATCGGCACGC CGGCCTATCA TTATGTCGAT
CTCAACACGC AGCTCAAGAT CGACGAGCGC CTCACCTTCC GGCTGGGCGT GACCAACCTG
ACCGACAAGC AGCCGCCGGT CTATACCAGC TTCTATCAGT CCAACACCTA TCCGGGCGTC
TACGACGTGC TGGGCCGCAG CTTCTACGCC GGGGCGACGG TCAAGTTCTG A
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| Protein sequence | MLTVRGTSSV RLRCWLLLGS AMLGSPALAQ GVSPVPDAAS APAEDIVVTG SRIARKDLTS
SSPLVAIAPS ALKTNASVTL DDTLTRLPQV TPSYGSGSND TSTGGTTTVA LRGLGAQRTL
VLLNGRRLTA GTYTGAVDLN MIPTALIESI EVITGGASAA YGSDAIAGVI NFRLKKNFEG
VQLDGQTGIT SRGDGFTSSL SLTAGGNFAD DRGNAVLSVD YAKRRGVSNR SRAFSRISRP
SGALPFGVYV PSALNLPAAG AVDGVFAGYG VAPGSVGPNS NLSFNANGSL FAPTSGINYD
GSGQDIVRLG NGVFYNSTGV SGLTIPLERF GLFGRAEYEV ADDINVYAEG GYQHFTSSLV
FGPGFNTLTV PTTNPFIPDD LRTVLASRPN PNASFSVLRR YADVGQRTAD FTTNSYRLLA
GVTGRIEAID GTFDVFASRG EQTVDRRDHN GVNLTTLNAL INAADGGASQ CAGGYDPFAL
NGGAACATLL RSTTIRNTKF KQNYVEANVQ GRLFSWWAGD VRFALGADRR SDSYDFQPDT
GVRTGQILGI EGVGVPAVNG SVTVKEVFGE LLVPILRDLP LVKAFDVTLG YRYSDYDLSG
GVDAYRIEGD WRVIDALRIR GGFSRAVRAP NVSELFTPQS PLTPIIGAPG APGQGDPCDV
RSAYRTGANA AQVRALCLAQ GVPGQIIDSY TFNNTQLVDG GITGGNPKLK PESANTYTIG
AVLTPRLPSS ILSNLSLSVD YYSIDLKKAI GAIPGAAIVQ QCYNLGGANA GYATDNVYCS
AIGRSDQTGQ INRLESFNVN LGRIKTSGID VSLGGTIRLG DDAGAIDLSG TVNWTEKYAV
TNFPGARPMD LAGSIGSSAG SNAGTPAAFP EWRAQANLTY RNGPFQVGVQ YRYIDKMIDV
SAIGIPNSTA IGTPAYHYVD LNTQLKIDER LTFRLGVTNL TDKQPPVYTS FYQSNTYPGV
YDVLGRSFYA GATVKF
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