Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_4283 |
Symbol | |
ID | 5199263 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 4725352 |
End bp | 4726020 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640583837 |
Product | GntR family transcriptional regulator |
Protein accession | YP_001264761 |
Protein GI | 148557179 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.0724479 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.899409 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGTCG ACGACACCGC CCCCGCCCTG CTGTCCGACC GCATCCGCAA CGCCCTGACC GACGAGATCG CGCGTGGCGA GCTGGCGGCG GGAACCCAGC TCGATGAGCA GCAGCTCGGC GACCGCTTCG GCGCGTCGCG CACCCCGGTC CGCGAGGCGC TCCGCCAGCT TGCGGTCAGC GGGCTGGTCG AGCTCCGCCC CCGGCGCGGC GTGGTCGTGA CCCGGCTGAC GCCCGGACGG ATCATGGACA TGTTCGAGGC GATGGCCGAG ATCGAGGCGA TGTGCGTGCG GATGGCGACC AACCGCATGT CGCCGCTCGA ACGCAGCCGG CTCATCCAGC TCCACGACAG CTCGGCGGGC TTCGTCGCGG CGGGCGACGT CGACGCCTAT GACGCGTTCA ACCGCGAGTT CCATGAGCTG CTCTACCGCG CGACGCACAA CGAGGTGCTG GTCGAGCAGG CGATCGCGAT CCGCACCCGC CTCACCGCCT TCCGCCGCAC CCAGCTTCGC CAGGGCAACC GGATCATTCG ATCGCGCGAG GAGCATGACG GCGTCATGGC CGCGATCGCC GAAGGCGACG GCGACACCGC CGCCCGCCGC ATGCGCGCCC ATATGCTCAA CGCCGCCAGC GCCTTGGAAC GCTATATCGC CGATCATGCG AACGGCTGA
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Protein sequence | MTVDDTAPAL LSDRIRNALT DEIARGELAA GTQLDEQQLG DRFGASRTPV REALRQLAVS GLVELRPRRG VVVTRLTPGR IMDMFEAMAE IEAMCVRMAT NRMSPLERSR LIQLHDSSAG FVAAGDVDAY DAFNREFHEL LYRATHNEVL VEQAIAIRTR LTAFRRTQLR QGNRIIRSRE EHDGVMAAIA EGDGDTAARR MRAHMLNAAS ALERYIADHA NG
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