| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4245 |
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| Symbol | |
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| ID | 5196522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4678698 |
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| End bp | 4679525 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 640583799 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001264723 |
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| Protein GI | 148557141 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.126058 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGGCC CGGCGGGCCT GCTCGACGGC CGGGTCGCGG TGGTGACCGG CGCGGCGCGC
GGCATCGGCC GGGCGATCGC CGCGCTGTTC CTGGAGCAGG GCGCGACGGT GGTCGCGGGG
GACGTGGCGC CGATCGACCT CGATCATCCC CGCTGCACCG CGATCGCCTG CGACGTGCGC
CGCGAGGAGG AGATGGCGGC GCTGTTCGAC CGGGCGATCG GCGACCATGG CCGGATCGAT
TGCCTGGTCA ACAATGCCGC GAGCCCCGGC GCGATCGACG GCATCGCGAC GCTGGCCGCC
CGGCAGTTCG ACGAGACCGT CGCCACCGTC CTGCGCAGCA CCTTCCTGGG CATGCATCTC
GCGCTGCCGG GCCTGCGCCG GTCGGACGCC GGCTCGATCG TCAACATTGG ATCGACCTCC
GCGCTGGTCG CGGCGCCGGT GCTGCAAGCC TATGGGGCGG CCAAGGCGGG CGTGGCGATG
CTGACCCGCA ACGCGGCGCT CGAACTCGGG CCGCTGGGCA TCCGGGTCAA TTGCCTGTGC
CCCGGCGGCA TCGCGACCGC GATGTACGGC ATCGCCGCCG GGCTGGAGCC CGACGCGGCG
GAGGCCGCCC GCGACCGCGT CGCCGCCAAT CTGGGGCCGT TGCAGCCGCT CGGCCGCGCC
GGCCGGCCCG AGGAGGTCGC GCAGGCGGCG CTGTTCCTCG CGGGCCCCTG GTCGAGCTAC
GTCACCGGGC AGGTGATCGC GGTCGACGGC GGGATGAGCG TTGGCCGCGC CATGCCGGCG
GACACCGCGC CGCAAGACTT CTTCCGCCGC GTGGTGGGTA TCGACTGA
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| Protein sequence | MSGPAGLLDG RVAVVTGAAR GIGRAIAALF LEQGATVVAG DVAPIDLDHP RCTAIACDVR
REEEMAALFD RAIGDHGRID CLVNNAASPG AIDGIATLAA RQFDETVATV LRSTFLGMHL
ALPGLRRSDA GSIVNIGSTS ALVAAPVLQA YGAAKAGVAM LTRNAALELG PLGIRVNCLC
PGGIATAMYG IAAGLEPDAA EAARDRVAAN LGPLQPLGRA GRPEEVAQAA LFLAGPWSSY
VTGQVIAVDG GMSVGRAMPA DTAPQDFFRR VVGID
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