| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4206 |
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| Symbol | |
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| ID | 5196098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4632796 |
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| End bp | 4635054 |
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| Gene Length | 2259 bp |
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| Protein Length | 752 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640583760 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001264684 |
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| Protein GI | 148557102 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.315685 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCATAC GGACCAAATC GATCTGTCTC ACGTCGGCGG GCTTCCTGGC CCTGTGCTTC
ACGGCGATGG GTGCCGCGGC GCAGGCGGCG GCATCGACGG ATGCGACCTC CGTCGAGACG
GGTTCGGGCG AAATCGTGGT GACCGCGAGC AAGCGCGAGC AGAAGCTGCG CGACGTGCCG
TCGGCGATCA CCGTCCTCGG TGGCGACACG CTCGCCCATC TCGGGGTCCG GTCGGTCCGG
GACTATGCGA CGCTGACGCC CGGGCTGACC ACCCAGGACA GCGGCAGCCC CGGCTATGGC
AAGATCTTCA TCCGTGGCCT CACCACCGGC AGCCTCCAGC AATCCGCGAC CACCGTCTAT
TATATCGATG ACGTGCCGTT CACGGCGAGC TCGGCCAATG GCGGCGGAGC CTTCATCGCG
CCGGATCCGG AACTGACCGA TGTCGAACGG ATCGAGGTGC TCAAGGGACC GCAGGGAACG
CTCTACGGCG CGTCCAGCCT TGGCGGCGTC ATCCGGCTCG TATCGAAGAC CCCCGATCCG
TCGGGCTTTT CGGGCAGCGC CAGGACCGAG ATGACCGCGA TCGACGGCGG CGGCGTGGGT
TATTCGGCCA GCGCCACGCT CAACGTGCCG CTGGTGATCG ACCGCCTTGC CCTGCGCGCC
ACGGGCTTCT ATCGCGAGGC GCCGGGCTAT GTCGACAATA TCGGCACCGG TACCGACAAC
GTCAATCGAA GCCGTTTCAA GGGCGGGCGC CTGGCTCTCC GCTGGACGCC GACCGAGCGG
TTGACCCTCG ATGCGGTCGG CCAGCTCCAG GACATCGACA CGCGCGGCCC CGCGCTGGAG
ACCAGCGTCG CCGGCACGCT GACCCCGCTC TATGGCGAGC GCAAATACAG CAATTTCTTC
GATGCGCCGA CGCGCGTTCG CTACCGGCTG GCTTCGGTCA CCGGCAGATA TGACACCGAC
CTTGGCCAGA TCATCGCCAC CGGCGCCTAT CTCAAGAGCA CCTTGCGCAC CGAGCTCGAC
CTGACCTCGA CCTATGCGCC GCTTTTCCCC GTGTTCGCCT CGGTGGGCTA TGTCTATCCG
GCGAACACCG GCGTGGCCGT CGTCTCGACG GTCCCGGCGG TCAAGAAGAC CGCGGAACTG
CGCTTCGCGT CCAGACGGCT GGGCGGCATC GAGTTCGTCG CCGGCGGCTT CTACACGCAT
GAGCGGATCG CCTCGCCGAC CGACATCGTC GCGCGCGCGA TGGCGACGAA TACCCAGTTA
CCGGCACCGT TGGGCTCGAT CATCACGACC CCGGTCAACG ACGCCTATGA GGAGCTCTCC
GCCTTCGGCA ATCTCACCGT CTATCTGGCG GACAATCTCG ACGTCACCGG CGGATTGCGC
TTCGCGCACA GCATCGAGGA CTTCGACGCC TCCTATGGCG GCGTCTATTA TACGGCGTTC
CTGGGCGGCA CGGTGCAGCT CCCGCCGGTC CATTCGAGCC ACGATCAGCT CACCTATCTC
GCGACCCTGC GCTGGCGGCC GACCTCGACG CTCAGCTTCT TCGCGCGCGC GGCGAGCGGC
TATCGCCCGG GTGGACCGCA GGTCGCCGCC GTCGTGCCCC CCGGTGCGCA GGCCAAAATC
GATCCCGACA CGGTGTGGAA CTATGAAATC GGCTTCAAGG GCGATTTCCT CGACAGGAAA
CTCAGCATCG AAGCGTCCGC CTATCGCATC GACTGGAACG ACATCCAGCT CTACACGATC
TTCAACGGCA CCCAGTTGCT GGCCAATGCC GGCAAGGCCA GGGTCGACGG CTTCGAGGTC
CAGGCGAGCG CGCGGCCGAC CGGGCTGCTC ACGGCAACCG CCAATCTCGG ATACACCCGG
TCGCGGCTCA CCGAGGTCGA TCCCGGCGTG ACCGCCTATA TCGGCGCGGC GGCGGGCGAT
CGCATTCCCC AGACGCCCCG CTGGACGGCG TCGGCCACGC TCGACCAGAT GATCCCGTTC
GGGGGCGATC TTCAAGGCCA GCTCGGCGCG ACCTTCCGCT ATCAGTCGGA CCGGGTCACG
TCGTTCCCCG GCAGTCTCTC GGATCCGAAC ATCCGCCTGC CCGGGCGCAC GACCTTCGAT
CTGCGAGCAG GGGTGAGCTA CCGCAGCTAC CAGTTCCAGC TTCGCGCCGA GAATATCACC
GATCGCAAGG GCATCGCGAA CTACATGTCC GGCGCCCCCG CATCCTCCTA TCTGATGCGG
CCGCGCAGCT TCTCGATCTC GATGAGCACC ACATTCTAG
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| Protein sequence | MRIRTKSICL TSAGFLALCF TAMGAAAQAA ASTDATSVET GSGEIVVTAS KREQKLRDVP
SAITVLGGDT LAHLGVRSVR DYATLTPGLT TQDSGSPGYG KIFIRGLTTG SLQQSATTVY
YIDDVPFTAS SANGGGAFIA PDPELTDVER IEVLKGPQGT LYGASSLGGV IRLVSKTPDP
SGFSGSARTE MTAIDGGGVG YSASATLNVP LVIDRLALRA TGFYREAPGY VDNIGTGTDN
VNRSRFKGGR LALRWTPTER LTLDAVGQLQ DIDTRGPALE TSVAGTLTPL YGERKYSNFF
DAPTRVRYRL ASVTGRYDTD LGQIIATGAY LKSTLRTELD LTSTYAPLFP VFASVGYVYP
ANTGVAVVST VPAVKKTAEL RFASRRLGGI EFVAGGFYTH ERIASPTDIV ARAMATNTQL
PAPLGSIITT PVNDAYEELS AFGNLTVYLA DNLDVTGGLR FAHSIEDFDA SYGGVYYTAF
LGGTVQLPPV HSSHDQLTYL ATLRWRPTST LSFFARAASG YRPGGPQVAA VVPPGAQAKI
DPDTVWNYEI GFKGDFLDRK LSIEASAYRI DWNDIQLYTI FNGTQLLANA GKARVDGFEV
QASARPTGLL TATANLGYTR SRLTEVDPGV TAYIGAAAGD RIPQTPRWTA SATLDQMIPF
GGDLQGQLGA TFRYQSDRVT SFPGSLSDPN IRLPGRTTFD LRAGVSYRSY QFQLRAENIT
DRKGIANYMS GAPASSYLMR PRSFSISMST TF
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