Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_4203 |
Symbol | |
ID | 5199966 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 4629418 |
End bp | 4630284 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640583757 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001264681 |
Protein GI | 148557099 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.202546 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTGACC CGTCCTGGCT GAAGAGCTTC GCCGCCGTTG CGCGCACCCT CAACTTCACC CTGGCGGGGG CGAGTCTGAA TCTGCGGCAA TCGACCGTCA GCGAACATGT GCGAAAGCTG GAGGCCGCCG CCGGCACGCG GCTCTTCGTT CGGGACACCC ATTCGGTCAG GCTGACCGTC GATGGGGAGG CCATGCTCGG CTTCGCCCGA TCGATCCTCG AAGCCAATGA TCGCGCCCTG CGCCATTTCG CGCGCACGGA CCTGAGGGGG TCGGTGCGCC TCGGCGTGAC CGAGGACGTC GTCCTCGCCG GCTTGCCCGA ATTGTTGCGG CAATTCACGG CGGAGCATCC GCACGTCGCG CTCGAACTGG TCGTCGGGCT GAGCGAGGAT GTGCGCGAGA AGCTCGAGCT GGGCATGCTC GATCTCGCCT TCATCAAGCG ACGGGCGAGC GACAAGCAGG GCGAACGGGT GTGGCGGGAG CCGCTGGTCT GGATCGCCGC GCCCGATTTC ATCCTGGATG CGAAGGCGCC GGTGCCGCTG ATCGTCCTGG CGCCCCCGGC GATCACCCGC ACGGCGGCGC TGACCGCCCT CGAAACTATC GGCGGCCATT GGCACATCGT CTGCACCAGC GGGACGCAGA GCGGCATTCA CGCCGCGGTC GCCGCCGGCC TGGGCGTCGC CCCCCATGCG CGATCGCTGG TGCCCCCGGG GCTGGATGAG GTTTCTTCGC CGGAACTGCC GCCGCTCGGC GATGTCGAGT TCGTCGTGCT GGCGGGCCGA CAGGGACATC GAGGTCCGGC ACGGGCCCTG GCCGAAGCCA TCAAGAAGGA CGGTTCGCTG CTGCGCCGGA AGAATTTCCG GAGCTGA
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Protein sequence | MLDPSWLKSF AAVARTLNFT LAGASLNLRQ STVSEHVRKL EAAAGTRLFV RDTHSVRLTV DGEAMLGFAR SILEANDRAL RHFARTDLRG SVRLGVTEDV VLAGLPELLR QFTAEHPHVA LELVVGLSED VREKLELGML DLAFIKRRAS DKQGERVWRE PLVWIAAPDF ILDAKAPVPL IVLAPPAITR TAALTALETI GGHWHIVCTS GTQSGIHAAV AAGLGVAPHA RSLVPPGLDE VSSPELPPLG DVEFVVLAGR QGHRGPARAL AEAIKKDGSL LRRKNFRS
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