| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4177 |
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| Symbol | |
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| ID | 5199808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 4595461 |
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| End bp | 4596450 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640583731 |
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| Product | helix-turn-helix domain-containing protein |
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| Protein accession | YP_001264655 |
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| Protein GI | 148557073 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.128864 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.103743 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAGTG TAGATCGACA CGGACCGGGA TCGATGCAGT ACACGCAATC GAATGACATG
CGGCGGATCG ATATCGGCAC GGCGAGAAGA GTGCTCTCGG CGCACCTGCT TCCCCACAAC
ATGTATCATG TCAGCTCGAA CAACGACCAC CAGTCGATCG CCATCGAGCA TCGTGACCTG
GACCAGATCA GCTTCAACCG GGTGATCTAT GACGAGCGGA TCAAAGTGGA AAGCCCCCAG
TTCCGTAATT TCAACACGCT CATGATCATA AGATCGGGCG AGGTCAGCGC TCGCCACGGG
GCCGCTTCCT TCTCTGCCAA GGCCGGCGAC GTCGTCCTGT TTTCCGGCAA GGCACGCTCC
ATCTTCGAGT TCAGCGCCGA ATTCGAGCAG ATGACCCTCA AGATTCCGAC ATCGATCATC
GATGCGGTCG CGGGAAACCA CAATTTCTCG GCGCATCTGC GTCCTGGCGT GCTGCGATGC
GACACGAATC CGCTGCTCCA GGCCATAGAG TCGATCTACG CCTCGATCGG GCAGCCCAAT
GATATTTATC GGTCCAGGGT CGTCCGCAAG GAGGCCGAAC GGCTGATTGC CGCGATGGTG
ATCGCCGCCT GCGGCGATGC CGGCCAGCCG GCCGAAGCTT CGGATTTTCC ACCGAGCCTG
GTCCGGGCAT GTGCGTTCAT CGAACGCAAC CTCGGGGGAG AGGTCTCGAT CGAGGATCTT
TGCCGGGTCG CGTCGATCTC GGCCTCGGGG CTCAATTACA TCTTCAAACG ATATCTCGGC
TTTTCACCAC TCCGCTACCT CGCCCTGTGC CGGCTGGAGG CCGCCAATGA GATGATCCTG
CGATATCCGG CGCGCCAGAT CACCGAGATT GCGCTCGACT GCGGCTTCCT GCATCTGAGC
CGCTTCTCCG GGCTCTATGC GAAGCGCTTC GGAGAACTGC CTTCACAAAC GCGCAATCGT
GCGCTGGGAG CGCTCTACCG GCCCAATTGA
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| Protein sequence | MLSVDRHGPG SMQYTQSNDM RRIDIGTARR VLSAHLLPHN MYHVSSNNDH QSIAIEHRDL
DQISFNRVIY DERIKVESPQ FRNFNTLMII RSGEVSARHG AASFSAKAGD VVLFSGKARS
IFEFSAEFEQ MTLKIPTSII DAVAGNHNFS AHLRPGVLRC DTNPLLQAIE SIYASIGQPN
DIYRSRVVRK EAERLIAAMV IAACGDAGQP AEASDFPPSL VRACAFIERN LGGEVSIEDL
CRVASISASG LNYIFKRYLG FSPLRYLALC RLEAANEMIL RYPARQITEI ALDCGFLHLS
RFSGLYAKRF GELPSQTRNR ALGALYRPN
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