Gene Swit_4131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4131 
Symbol 
ID5196490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4537656 
End bp4538096 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content67% 
IMG OID640583686 
Productcytochrome c, class I 
Protein accessionYP_001264610 
Protein GI148557028 
COG category[C] Energy production and conversion 
COG ID[COG3474] Cytochrome c2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.102323 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCCG TCTCCGCCCA TATCCCTGAC ACGAGGATCG GTTTCAACAT GAACCCTTCA 
CGTCACGTTT CGCAGATTTT CGCCTGCATC CTCCTCGCCG CGGGGGGGGG CGCCCATGCC
GCCGGCGATG CTACGCTGGG GCAGGCCCAG TTCGCCCGCT GCACGTCGTG CCATGGCATT
TCCGCATCGT CCCCGCCGAA GATCGGCCCG AGGCTCGACG GCGTTTACGA TCGCCCGGCC
GCGTCGATCG ATCCCGCCTA TGGATATTCC GACGCCCTGC GGCTGGCGAA GATCCGCTGG
GACGACATGT CGCTCGATCG GTTCCTGGCC GCGCCGCGCA GCTTCGTGCC CGGCAACAAG
ATGACCTTCA CCGGCGTGGC CGACGCGGGC GTGCGCGCCA ACATCATCGC CTATCTCAAG
ACCCGCGAGC AGGAGCGCTG A
 
Protein sequence
MTPVSAHIPD TRIGFNMNPS RHVSQIFACI LLAAGGGAHA AGDATLGQAQ FARCTSCHGI 
SASSPPKIGP RLDGVYDRPA ASIDPAYGYS DALRLAKIRW DDMSLDRFLA APRSFVPGNK
MTFTGVADAG VRANIIAYLK TREQER