Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_3926 |
Symbol | |
ID | 5200365 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 4311547 |
End bp | 4313085 |
Gene Length | 1539 bp |
Protein Length | 512 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640583482 |
Product | signal transduction histidine kinase |
Protein accession | YP_001264409 |
Protein GI | 148556827 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3920] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCAGC CCGCCAAACT GGCCTTCGCC CGCCTGTCCA CCGGCACCAA GATGCTGCTG ATCCTGTCGG CGGCGATGCT GCCGCTGGGT TTCATCGCGC TGCTGACCTC GCTCGACATG GCCCGGTCGG CCTCGGCCGA GCAGCGCATG GCGGTGCGGA CGGCGATGGC CTTCCACGCC ACCCGCGTCG AGATGGTCAT CGACCGAGGG CTCGATGCGG TGCGATCGCC CCAGGCCAGC CTCGAGCCCG CCTCCGCCCT CTGCGCGGCG ATCGCGCGGC AGGCGCGTCG CGACCGCAGC GGGCGGCCGC CGGTCGCGAT CTTCGACGGC GGCCGGCGCC GGATTTGCCA GTCGCACGGC GCGCCGATCG AGCGGATCGC ACCGGTCGAT CAGGGCGTCG ACCATGTCTG GCTCGACCTC CAGCGCCACA GCTTCCGCTT CACTGCGGCT CGCCGCGACG GCCTGCTGTT CGAAGCGGAC ATCCCGCTCG ACGATATCCG TCTCGCCGTC TCCTCGGGTG GCGGGCTGCC GCTCAACCGG ATGATCCTGC GGCAGGGCTC CGTCGACGTC GTGCTGGTCG ATCATGGCGA GACCGCCGAA AACGACCTGT TGCGGCTCTC GCAGCCGCTG GCCGGGGGGC AGCTCGCGCT GATCGCCGAA TATCGGCTGG CGCCGTCGCG GGCCCGGACG ATGCTCGTCG TCCTGCTGCC GCTGCTGATG TGGGCCGCCG CCGCGTTCAC CGGATGGCTG ATCGTCAACC GCCTGCTGCT GCGCCCGCTC AGCCAGCTCA AGCAGTCGAT CGACAATTGG AAGGGCGGCC ACAGCTCGCT GCACCTGCCC CGGCTCACCA CGCCCAGCCA GGAGATACGC GACCTGGCCG AGAGCTTCGC CGCGGTCGCG GCGCGCATCC ACGACCATGA GCTGGAGCTG GAGGAGGGCC TCGCCCGCCA GACCCGCCTG ACCCGGGAGG TCCACCACCG GGTGAAGAAC AATCTTCAGG TCGTCTCCAG CCTGATCAAC CTGCACGCGC GCGGGGCCGA AGGCGCCGTC GCCGACGCCT ATGGCGCGAT CCAGCGCCGG GTCGACGCGC TCGCCGTCGT CCACCGCAAC CATTATGCGG AGCTGGAGGA GAATGAAGGC GTCTCGGTGC GGGCGCTGGC CGGCGAGCTG GCGACGTCGC TCCGGGCGTC GGCCCCCGCG GCCGCCACCG GCATGCCGAT CGCGCTCAAC CTGATCGACG CGCATGTGAC GCAGGACATC GCGGTGCCGA CCGCCTTCTT CATCACCGAG GTCGTCGAGC TGCTGATGCA TTGCAACCCG CAGGGCTCGG TGCTGATCTC GCTCGAGGCG ACCGACCGGC CCGGGCGCGC CAATCTGCGG ATCGAGACGG TCGGCATGGC CGAAGGCGCG CTCGACGACT ATCCTGGGAT CGGCCGTTTC GAACGGGTCG TCACCGGCAT CGCGCGCCAG TTCCGCTCGC CGCTTTCGCA GGATCTGCAG ACCGGTCGCT TCGAGGTCGA GATCGGCGTC CAGCCCTGA
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Protein sequence | MKQPAKLAFA RLSTGTKMLL ILSAAMLPLG FIALLTSLDM ARSASAEQRM AVRTAMAFHA TRVEMVIDRG LDAVRSPQAS LEPASALCAA IARQARRDRS GRPPVAIFDG GRRRICQSHG APIERIAPVD QGVDHVWLDL QRHSFRFTAA RRDGLLFEAD IPLDDIRLAV SSGGGLPLNR MILRQGSVDV VLVDHGETAE NDLLRLSQPL AGGQLALIAE YRLAPSRART MLVVLLPLLM WAAAAFTGWL IVNRLLLRPL SQLKQSIDNW KGGHSSLHLP RLTTPSQEIR DLAESFAAVA ARIHDHELEL EEGLARQTRL TREVHHRVKN NLQVVSSLIN LHARGAEGAV ADAYGAIQRR VDALAVVHRN HYAELEENEG VSVRALAGEL ATSLRASAPA AATGMPIALN LIDAHVTQDI AVPTAFFITE VVELLMHCNP QGSVLISLEA TDRPGRANLR IETVGMAEGA LDDYPGIGRF ERVVTGIARQ FRSPLSQDLQ TGRFEVEIGV QP
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