| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3925 |
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| Symbol | |
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| ID | 5199381 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 4310210 |
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| End bp | 4311004 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640583481 |
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| Product | two-component response regulator |
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| Protein accession | YP_001264408 |
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| Protein GI | 148556826 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0784] FOG: CheY-like receiver
[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCGCTCG GCCAGAAACT CGCCCCCCAC CTGCCCTTCC TGCGTCGTTA CGCCCGGGCG
CTCACCGGCA GCCAGAGCCA TGGCGACAAT TATGTGCGGG CCACGCTGGA GGCGATCGTC
GCCTCCCCCG ACGGCTTCCC CGGCGGGGTC GACGTCCGGG TCGGCCTCTA CCGCACCTTC
CAGGCGATCT GGAGCTCGGC CAATTATGAC GAGATCGAAA CCCCGACCGC CGACGCCGAG
CGCGAGGCGA TCGCCCAGGC GCGGCTCAAC GCGATCACGC CGCTGTCGCG CCAGGCCCTG
CTGCTGACCG CGATGGAGGG CTTCACCGTG GCCGACACCG CCTATCTGAT CGAGGCCAGC
CCCGAGGAGG TCGAATCGCT GGTCGCCGAC GCGATCGCCG AAATCGATCG CCAGACCCGG
ACCGACGTGC TGATCATCGA GGACGAGCCG ATCATCGCGA TGGACCTCGA GACCATCGTC
CGCGATCTCG GCCACAGCGT CAGCGGCGTC GCCGTGACCC GCGACGAGGC GGTGGCGCAG
GCGCACGCCC ATCGGCCCGG CCTCGTCCTC GCCGACATCC AGCTCGCCGA CGACAGCTCC
GGCATCGACG CGGTCAAGGA CATATTGGCC GAGTTCAGCG TACCGGTGAT CTTCATCACC
GCCTTCCCCG AACGGCTGCT GACCGGCGAG CGGCCCGAAC CGACCTTCCT GATCACCAAG
CCCTTCCAGC GGTCGACGGT GAAGGCCGCG ATCAGCCAGG CGCTGTTCTT CAACGCGGCC
ACGATCGAGG CCTGA
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| Protein sequence | MSLGQKLAPH LPFLRRYARA LTGSQSHGDN YVRATLEAIV ASPDGFPGGV DVRVGLYRTF
QAIWSSANYD EIETPTADAE REAIAQARLN AITPLSRQAL LLTAMEGFTV ADTAYLIEAS
PEEVESLVAD AIAEIDRQTR TDVLIIEDEP IIAMDLETIV RDLGHSVSGV AVTRDEAVAQ
AHAHRPGLVL ADIQLADDSS GIDAVKDILA EFSVPVIFIT AFPERLLTGE RPEPTFLITK
PFQRSTVKAA ISQALFFNAA TIEA
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