| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3919 |
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| Symbol | |
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| ID | 5196242 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4302944 |
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| End bp | 4303936 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640583475 |
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| Product | PepSY-associated TM helix domain-containing protein |
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| Protein accession | YP_001264402 |
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| Protein GI | 148556820 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.666066 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGGGCTGA CCGGCGCGAT CCTCGTCCAT CGCGACGCCT GGATCGGCCT GCCGCACGCA
TCGGACGCCC GGGTGGCCGA CGGGGCGGCG CTCGCCGCCG CGACCGCGCG GCTGATGGCC
GATCCGGCGG CGCGGCCGCA GAGCATCCTC TATGCCAGCG ACGGCTTCGG CCTGCTGCGC
CTCTCCTATG CCAAGGGGGC GGGCGCCTAT GCCGATCAGG CGGGCGACAT CGTCAGCCGC
TGGGACAGCC AGTGGGAACG GCCCGAGCTG TGGCTGTTCG ATCTCCACCA CCATCTCTTC
GCCGGCGACG CGGGCGAGGT GGTGATCGGC ATCGCCGCGC TGTGCGGGCT GTTCTTCGTG
ATCTCGGGCG TGGTCCTGTG GTGGCGGACC CGCAGGACCT TCGAATGGCG GCTATGGCCG
CGCCGGATGA GCCGCCCGGC GATCGTCCGC CACCATCGCG ACCTCGGCAT CGTCATGGCG
CCGCTGCTGG CGCTGTCGCT CTACACCGGC GCGGTGATGA TCTTCCGGCC GGTCGCCGTC
GTGGCGCTCG GCCCCGGCAC GTCCGCCGCG GTCGAACGGG CGATGAAGCC GCCGAAGCCG
ATCGGCGTGC CGCTGTCCGA CGCCATCGAC TGGGCCGCGA TCATCCGCGC CGCGCATGCC
CGCTTCCCCG ATGCCGAGCT GCGGCTGCTC AGCCTGCCGC GCAAGGACAG CGGGCTGATC
GCGGTGCGGA TGCGCCAGCC CGAGGAATGG CTGCCCAACG GCCGGACGAT GCTGTGGTTC
GCGGCCGACA GCGGACGGCT GGTCGCCGCG CGCGACGCCC GCGGCTTCGA CCGGCAGGCG
CGCGGCTACA ACATGATCTA TCCGATCCAC GCGGCGAAGG TCGGCGGCCT CGGCTGGCGG
ATCGTCATCA CCCTGTCGGG GCTGGCGCTC GCGCTGCTCG GCAGCCTCGC GGTGTGGAGC
TTCTGGTTCC GGCGGCCGAA GCGTCGCCTA TAG
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| Protein sequence | MGLTGAILVH RDAWIGLPHA SDARVADGAA LAAATARLMA DPAARPQSIL YASDGFGLLR
LSYAKGAGAY ADQAGDIVSR WDSQWERPEL WLFDLHHHLF AGDAGEVVIG IAALCGLFFV
ISGVVLWWRT RRTFEWRLWP RRMSRPAIVR HHRDLGIVMA PLLALSLYTG AVMIFRPVAV
VALGPGTSAA VERAMKPPKP IGVPLSDAID WAAIIRAAHA RFPDAELRLL SLPRKDSGLI
AVRMRQPEEW LPNGRTMLWF AADSGRLVAA RDARGFDRQA RGYNMIYPIH AAKVGGLGWR
IVITLSGLAL ALLGSLAVWS FWFRRPKRRL
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