| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3829 |
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| Symbol | |
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| ID | 5198374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 4205232 |
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| End bp | 4205879 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640583384 |
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| Product | protein translocase subunit secB |
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| Protein accession | YP_001264312 |
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| Protein GI | 148556730 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1952] Preprotein translocase subunit SecB |
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| TIGRFAM ID | [TIGR00809] protein-export chaperone SecB |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.619122 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0900877 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTCGCG GGCGCGGCGG AGGTTCCCCG CCTTCGCGGG GATCGGCCCA TTGCTCCGCC
CCGTCCCGCC TGCTAGGCGC GGGACGCATT GCCGGAAGCG GTCGGAAGCC CGCCTCCCGG
CTCCCACTTT CGACGGAAAG ACAGACAATG AGTGAAGAGA CGGGCGCCGC CGATACGCTG
ACCAACGGCG AGGACCATCT GCCGCAGGTC GCGCTGATCG CCCAATATGT GAAGGACCTG
TCGTTCGAGA ATCCGAGCGC GCCCGGCATC TACCAGGCGC CCGAGCAGCC GAAGATCGAC
GTCCAGTTCA ACATCGGGTC GCAGCAGGCC GGCGAGGACG TCTATGAGGT CGCGCTCAAG
ATCGAGATCA AGGCGACCCA GGGCGACCTG ACCGCCTATG CCGTCGAGCT GGTCTATGCC
GGCCTGTTCG GCATCCGCAA CGTGCCGGAA GAGCATCTGC CGCCCTTCCT GCTGGCCGAG
GCGCCCCGCC TGCTCTTCCC GTTCGCGCGC CGCGTCGCCG CCGACGCGAT TCGCGACGGC
AACTTCCCGT CGCTGGTGCT CGAGCCGATC GACTTCGGCG CGCTCTACAT GCAGCAGGCC
GAGCAGCAGA CCGCCCTCGC CGAATCGCAG CCGGCGGGCG AAGCCTGA
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| Protein sequence | MTRGRGGGSP PSRGSAHCSA PSRLLGAGRI AGSGRKPASR LPLSTERQTM SEETGAADTL
TNGEDHLPQV ALIAQYVKDL SFENPSAPGI YQAPEQPKID VQFNIGSQQA GEDVYEVALK
IEIKATQGDL TAYAVELVYA GLFGIRNVPE EHLPPFLLAE APRLLFPFAR RVAADAIRDG
NFPSLVLEPI DFGALYMQQA EQQTALAESQ PAGEA
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