Gene Swit_3794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3794 
Symbol 
ID5199765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4163436 
End bp4163840 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content63% 
IMG OID640583349 
Producthypothetical protein 
Protein accessionYP_001264277 
Protein GI148556695 
COG category[S] Function unknown 
COG ID[COG4731] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.134727 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATGA TACTGATGGC CTTGGCGATG GCGGCCACTG CGAGTCCCGA TGCAGTGGTC 
GGCCGCTGGA AAACCGAAAC GCGCAACGGC ATCGTAGAGA TCACACGCTG CGGCGCTTCG
CTATGCGGGA AGATACTGGG CTCGGACGGC CTCACTGCCA ACCCCGCGCT GAAGGACACC
AACAACAAGG ACGAGAAGCT GCGCGGCCGC GCGCTCAAGG GTCTGCAGAT CCTTGGCGGC
TTCAGCTTCG AGGATGGCGT CTGGGACAAG GGCACCATCT ACAATGCCGA GGACGGCAAG
ACCTACGGCG CGCGGATCAC GCCCGTCGAT GCGAACACGT TGAAGCTGAG GGGCTGCATC
TTCGTGCCGC TTTGCAAGAA CCAGACCTGG ACCCGCGTGC GCTGA
 
Protein sequence
MSMILMALAM AATASPDAVV GRWKTETRNG IVEITRCGAS LCGKILGSDG LTANPALKDT 
NNKDEKLRGR ALKGLQILGG FSFEDGVWDK GTIYNAEDGK TYGARITPVD ANTLKLRGCI
FVPLCKNQTW TRVR