| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3766 |
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| Symbol | |
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| ID | 5197217 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 4131477 |
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| End bp | 4134239 |
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| Gene Length | 2763 bp |
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| Protein Length | 920 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640583321 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001264249 |
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| Protein GI | 148556667 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCATA TGCATTTCAG GACACGCGTC AGCTCGCTTG CCATGGCCGC GATGGCCGGG
CTCCTCGTCG GCCTGCCGAT GGCGGCGTCG GCGCAGGCGC TGCCCGCCAG CGCGGCCGAC
GAGCCGGCGG CGGACCAGGA GATCACCGTC ACCGGCTCGC GCATCATCCG CGACGGCACC
GAGGCGCCGA GCCCGCTGAC CGTGGTCGGC GCGGACCTGC TCGACAAGCG CCAGGCGGTG
AACGTGGCCG ACGTGCTCAA CGAGCTTCCG GCCTTCCGCG GTTCCACCAC GCCGGCCAGC
ACCACGAACA ACACCAAGAA CGTCGGCGCC AACTACGCCA ACCTCCGCAG CCTCGGCACC
AACCGGACGC TGACCCTGGT CGACGGCGTC CGCCATGTGC CCTCGTCCGA CCTGGGCCAG
GTCGACCTCA ACTTCATCCC CTCGCTGCTC GTCGAGCGCG TCGAGGTCGT CACCGGCGGC
GCCTCCGCGG TCTACGGGTC GGACGCGGTC GCGGGCGTGC TCAACCTGGT GCTGCGCCGC
AAATATGAAG GCTTCCAGGT GCGCGGCGAC GTCGGCATGA CGCAGCATTC GGACGGCAAG
GAATATCGCG GCGCCTTCCT GGGCGGCGTG CAGTTCGGCG GCGGGCGCGG CTATGCGACG
CTGGCGGTCG ACGTCTATCG CAGCGACGGC GCCAAGGACG CCTATTCGCG CGACTGGGGC
CGGCGCTCCT ACGGCCTCGT CACCAACGTC GCCGGCGCGA CGCCGGTGCG GATCATCGCC
TCGAACGTCC AGAACGCGAC GATGACGCCG AACGGCATCA TCACCTCGGG CCCGCTGCGC
GGCACCACCT TCAACGCCGA CGGCACGCCG CGGCCGTTCA CCTATGGCCA GCTTCCCGGC
GCGCAGCTCA TGATCGGCGG TGAGGGCCAG GGCACCCGGC TCTATCTCGG CGACGCGCTG
CTTCCCGAGC TCGACCGGCG GGTGGCGTAT CTGCGCACCG GCTACGAGGT CTCCGACGCG
CTCGAGCTGA GCCAGGACTT CTCCTATGGC TGGTCGAAGG GCGTCGCCTC GACCCCCTAT
TATTTCAACT ATGGCAACCT GACGATCCAG CGCGAGAATC CGTTCCTGCC GGCGTCGGTC
GCGGCGCAGA TGGACGCCGC GGGCGTCTCC TCCTTCGGCT TCGGGCGGCT GTGGACCGAC
GTGGGCCGGC CGGTGCCGGT CTCGACCACC GAAACCTGGC GCAGCGTGAC GGGGGCCAAG
GGCTCGCTCG CGCCGAGCTG GAACTGGGCC GCCAATTTCG AATATGGCCA GAACAAGTAT
CGCCAGCAGA TCCTGGGCGC GTTCATGGCG GCGCGCGCGG CCGAGATGAT CGACGCGGTA
AGCGCGCCCG ACGGCTCGGT CGTCTGCCGC GTGGCGCTGA CCAACCCGTC GACCGCCTGC
CGCCCGTTCA ACCCGTTCGG CACCAACCGC AACACCGCCG ACGTCCAGAA TTATTTCCGG
GCGGACCAGG ACCTGCGCCA GACCCAGCGC GAGATCGCGG CCAGCGCGGG CATCACCGGC
AAGCTGTTCG ACATCGGCGC CGGCCGCTGG GGCGTCGCGA TGGGCGGCGA ATATCGCCGC
GAGACGCTCC ACGCGGTCGC GGACCCGCTG TCGCGGGCCG GCGTGTTCAC CTTCGGCAAT
GCGCGCAACG TCGACGGCAA GTTCAACGTC AAGGAAGCCT ATATCGAGCT GGAGGCGCCG
CTGCTCGCCA ACCTTCCGTT CGTCGAGGCG CTGACCCTGA ACGGCGCCTA TCGCTATGCC
GACTACAGTT CGAGCGGCGG CATCAGCATG TGGAAGCTGG GCGCCACCTG GGACGTGTCG
GACGACCTGC GCTTCCGCGT CACCCGCTCC CGCGACGTGC GCGCGCCGAA CATCCCCGAG
CTGTTCACCC CGGCGCGCGG CCTCGCGACG CAGACGATCC TCGATCCGTT CCGCGGCAAT
GCCGCGACGC TGGTCTTCCC CTTCGTCCAG GGCAATCCCA ACCTGAAGCC GGAGACCGCG
AACACGCTGT CGTTCGGCGC GGTGCTGAAG CCCTCCTTCA TCCCAGGCTT CAACTTCTCG
GTCGACTATT ACGACATCAA GATCGACGAC GCGATCGCGA CGGTCGCGCC GCAGGACATC
GTCAACCTGT GCTTCGGCGG CCAGAACGAC GCCTGCAGCC AGATCGTCCG CGACGGATCG
GGCACGATCA CCCAGATCAG CAGCACCGGC ATCAACATCG CCACCCAGCG CACCAAGGGC
ATCGATCTCG AGCTCGGCTA CCGGACCGAC CTGGGCGAGG GCAAGCTCGA CTTCCGCGTC
TTCGCCAACC ACACGATCAA GTCGACGCTG GTCAACGGCG CGCTCATCAC CCGGCTGGCC
GGGCAGAACA ACGGCGCCGG CACCCCGTCC TGGGCAGCGA GCGCGATCGT CGGCTATGAC
ATCAACCGGA TCTCCGCGAC CTTGCAGGCC CGCTTCATCA GCGCGGGCAA GTACGACCGG
AGCTTCGTCG AGGGCCGCGA CATCGCCGAC AACACGCTGC CGAGCGCGAC CTATCTGAGC
CTCAACGCCC AGTATCGGAT CGGCCCGGCG GAGGAACCCG GCCGCTACAA GCTGTTCGCG
ACGGTCGACA ATCTGCTCGA CAAGGACCCG CCGGCGGTGC CCGCCTCGGT GCTGCCGACC
AACCCGCAAT TCTACGACGT CCTCGGGCGC CGTTTCCGGG TCGGTTTCTC GGCGAACTTC
TGA
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| Protein sequence | MSHMHFRTRV SSLAMAAMAG LLVGLPMAAS AQALPASAAD EPAADQEITV TGSRIIRDGT
EAPSPLTVVG ADLLDKRQAV NVADVLNELP AFRGSTTPAS TTNNTKNVGA NYANLRSLGT
NRTLTLVDGV RHVPSSDLGQ VDLNFIPSLL VERVEVVTGG ASAVYGSDAV AGVLNLVLRR
KYEGFQVRGD VGMTQHSDGK EYRGAFLGGV QFGGGRGYAT LAVDVYRSDG AKDAYSRDWG
RRSYGLVTNV AGATPVRIIA SNVQNATMTP NGIITSGPLR GTTFNADGTP RPFTYGQLPG
AQLMIGGEGQ GTRLYLGDAL LPELDRRVAY LRTGYEVSDA LELSQDFSYG WSKGVASTPY
YFNYGNLTIQ RENPFLPASV AAQMDAAGVS SFGFGRLWTD VGRPVPVSTT ETWRSVTGAK
GSLAPSWNWA ANFEYGQNKY RQQILGAFMA ARAAEMIDAV SAPDGSVVCR VALTNPSTAC
RPFNPFGTNR NTADVQNYFR ADQDLRQTQR EIAASAGITG KLFDIGAGRW GVAMGGEYRR
ETLHAVADPL SRAGVFTFGN ARNVDGKFNV KEAYIELEAP LLANLPFVEA LTLNGAYRYA
DYSSSGGISM WKLGATWDVS DDLRFRVTRS RDVRAPNIPE LFTPARGLAT QTILDPFRGN
AATLVFPFVQ GNPNLKPETA NTLSFGAVLK PSFIPGFNFS VDYYDIKIDD AIATVAPQDI
VNLCFGGQND ACSQIVRDGS GTITQISSTG INIATQRTKG IDLELGYRTD LGEGKLDFRV
FANHTIKSTL VNGALITRLA GQNNGAGTPS WAASAIVGYD INRISATLQA RFISAGKYDR
SFVEGRDIAD NTLPSATYLS LNAQYRIGPA EEPGRYKLFA TVDNLLDKDP PAVPASVLPT
NPQFYDVLGR RFRVGFSANF
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