| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3758 |
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| Symbol | |
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| ID | 5196276 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4120633 |
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| End bp | 4122936 |
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| Gene Length | 2304 bp |
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| Protein Length | 767 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640583313 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001264241 |
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| Protein GI | 148556659 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.626762 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAAGT CCAACCGGGT CAGGATCATG CTTCTCGGCG GCGCGGCGCT ATGGCTGGGC
GCCAGCATGG CCCAGGCCCA GGTCGCCGCG GATTCGGCCG ACGATGCGGC CGGCGGCCTG
CAGGAGATCG TGGTCACCGC GCAGAAGCGC GCCCAGAACA TCCAGCGGGT GGGCATCGCC
ATCACCGCGG TGACGCCCGA GCAGATCGCC AACCGCAACA TCGCCAGCAG CGCCGATCTC
GCCGGCAAGG TGGTCGGGCT GGAAAGCTAT TCGCCCTATG GCCCCGGCAC CTCGTCCAAC
GTCGTGATCC GCGGCATCGG CCTCAACGAC TTCGGCGAAG GCCATGAGGC GCCGGTCACC
TCCTATGTCG ACGAATTCTA CATCGTCGCG GTCCCGGCGG TCGACTTCGC ACTGTTCGAC
CTCGACCGGG TCGAGGTGCT GCGCGGCCCG CAGGGGACGC TGTTCGGGCG CAACTCGACC
GGCGGCCTGA TCAACTACAT CACCAAGCGC CCGAGCCAGA CCGCCGAGGG CTATCTCTCG
GCCAGCTACG GCCGCTTCAA CGACCTCAAG CTCGAAGGCG CCGCGACCGC GCCGCTGAGC
GACACGCTGT CGATGCGCCT GTCGGGCACG TCGCGCCACA GCGACGGTTT CCAGAGGAAC
ATCAACCCCG CGCTGGAGCG CGGCGGCCAG GCCGGATCGG ACGCCGCCCG CCTCCAGCTC
CGCTACCAGG GCGACGACGG CTGGGACATC CTGCTCAAGG GCGAATATGG CCGCACCAAG
ACGACCCATG CCTATTATGA GAGCAAGACG GGCTTCGTCG ACGCCAACGG CCTGGTGGTC
GCCGACCCGA CGATCGTCGA CGCGGTCGGC TATGCCGAGC GCAACACCCC GGCGGCGAAG
AAGAACGTCG TCAACACCAA CGACGCGGCC TTCCTCCGTT CGTCCGGCTA TTCGGGCCTG
CTGCGGATCG AGAAGAAGTT CGGTGACACG ACCTTCACCA GCCTGACCGG CTACCAGTCG
TACAAGCGGC GGATGCAGGA GGACAGCGAC GGCACCCCGA ACCCGCTGGT CTTCGCGAGC
TTCCCCTATC AGGGCAAGCA GCTGACCCAG GAACTGCGCC TCTATCATGA CGGGCAGTCG
ACCCGCTGGA CGGTCGGCCT CTACGGCATG CGCGCGCTGG GCAAGGACCA GCCGACGGCG
GTGTTCAACT TCCCGCTCGA CGGGCCGACC GCGGTCGATC CGGCGACGGG GCTCTACAAC
GGCACCTATT TCCCGATCAG CCTCAACGCC GACTGGCGGC TGCGGACCAA TTCGGGCGCG
GTGTTCGGCC AGATCGAGCA GGACTTCGGC AAGTTCACCG CGATCGGCGG CATCCGCGTA
ACCCGCGACC GCAAGACCTT CGCCGATCGC GACAATGCGG CGCTGCGCGA TTGCGGCGGC
GGCGCGGTGG GCGACTGCTT CCTGGTCGGT GACGGCGGCA CCGGCACCCC GGTCCCGTTC
CGGCTGAAGT ACAGGGCCAC CCTGTGGTCG GGGAAGATCG AGCTCGACTA CAAGCCCGAC
AGCAACAACC TGCTCTATGC CAGCATCTCG CGCGGGACCA AGGCCGGCGG CTTCAACAAC
GGCTTCTATC CCACCGGAGT CTCGCTCGCG CGGATTCCCT ATGGCGATGA AACGCTGATC
TCCTACGAGG TCGGGCAGAA GTCGACGCTG TTCGATCGCA AGCTGCGCAT CAACACCTCG
GCCTTCTATT ACGACTATAA GGACTATCAG GCGTTCAACT ATGTCGGGCT GGCCGGCCTG
ATCACCAACC AGGACGCGAC CGCCTACGGC ATCGAGACCG ATATCGAGGC GGCGGTGACG
CCGGAGCTTC GCCTCTATGC GGCAGGCGCC TATCTGCACA CCGACATCGA GGACGTGGCG
AAGGTCACCC CGGTGGGCAC CACGGTCGTA GCCGATCGCC CGATGGCCTT CGCGCCGAAG
TGGAGCGCGA GCGGCGGCGC GACCTACACG ATCGCGCTGC CGAACGACCA GAGCCTCGCG
CTCGACTGGA ACTTCGAGGC GCGGTCGGCC CGCTATTCGG GCAATTTCGG CGATCCGGGC
ACGCAGCTCG AAGGCTATTT CAAGCATAAT GCCTCGATCA CCTACGAGGC GGCCGAGCAT
TGGCAGCTGC GGGCGTTCGT CGACAATATC AGCAACCGGC TCAACACCAC CTATGGCGGC
CCGTCCTTCG CGTCGCTCGG CATCATCCAG GTGCGCTACG CGATGCCGCG CACCTATGGT
GCGGCCGTGC GCTATCGCTG GTAG
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| Protein sequence | MSKSNRVRIM LLGGAALWLG ASMAQAQVAA DSADDAAGGL QEIVVTAQKR AQNIQRVGIA
ITAVTPEQIA NRNIASSADL AGKVVGLESY SPYGPGTSSN VVIRGIGLND FGEGHEAPVT
SYVDEFYIVA VPAVDFALFD LDRVEVLRGP QGTLFGRNST GGLINYITKR PSQTAEGYLS
ASYGRFNDLK LEGAATAPLS DTLSMRLSGT SRHSDGFQRN INPALERGGQ AGSDAARLQL
RYQGDDGWDI LLKGEYGRTK TTHAYYESKT GFVDANGLVV ADPTIVDAVG YAERNTPAAK
KNVVNTNDAA FLRSSGYSGL LRIEKKFGDT TFTSLTGYQS YKRRMQEDSD GTPNPLVFAS
FPYQGKQLTQ ELRLYHDGQS TRWTVGLYGM RALGKDQPTA VFNFPLDGPT AVDPATGLYN
GTYFPISLNA DWRLRTNSGA VFGQIEQDFG KFTAIGGIRV TRDRKTFADR DNAALRDCGG
GAVGDCFLVG DGGTGTPVPF RLKYRATLWS GKIELDYKPD SNNLLYASIS RGTKAGGFNN
GFYPTGVSLA RIPYGDETLI SYEVGQKSTL FDRKLRINTS AFYYDYKDYQ AFNYVGLAGL
ITNQDATAYG IETDIEAAVT PELRLYAAGA YLHTDIEDVA KVTPVGTTVV ADRPMAFAPK
WSASGGATYT IALPNDQSLA LDWNFEARSA RYSGNFGDPG TQLEGYFKHN ASITYEAAEH
WQLRAFVDNI SNRLNTTYGG PSFASLGIIQ VRYAMPRTYG AAVRYRW
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