Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_3583 |
Symbol | |
ID | 5199580 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 3946626 |
End bp | 3947798 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 640583138 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_001264067 |
Protein GI | 148556485 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.445103 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCGGC GGCAAGCCCT CCGGCTGCTC GCGGCGTCGG CCTTCGCGCT CGGATCGGCG CGGCCGGCGC TTGCCGCCCC GGGCGGCCCG CGCAAGGTGG TGGTGATCGG CGCCGGCATC CTCGGCGCGG CGATCGGCTA TGAACTGGCC AAGCGCGGCG CGGACGTGAC GATCCTCGAT CGCACCGGCC CCGCCGCCGG CGCCACCGGC AACAGCTTCG CCTATCTCAA CGCCTCGACC AAGGCGTCGT CGCGGCCCTA TTTCGGGCTG AACTGGCTGG GCATGGCGGG ATGGCGCGCC TGGCAGCAGG AGCCGGGCGC GGCCCTGCCG CTGCGCTGGG GCGGCGCGGT CTATTGGCGG GGCGACGCGG CGGCGACGCA GCAGCTCGCG GCGTCGCTGA ATACGGTCCG TGGCTGGGGC TATGCCGGCC AGGCCGTGGA CGGCGCCGAC ATCCGCCGGC TGGTGCCGTC GGTCACCGTG CCCGGCGATC CCAGCGGGGC CTTCTTTCCC GAGGAGGGCA GCGTCGATCC GGCCGAGGCC GTGGCGGCCC TGCTGGCGCG GGCCCGGCAG CATGGCGCGC GGACCGTCTT TCCGGCGGAG GTCACCGGGC TGATCGTCGC GGGCGGGCAG GTTCGCGGCG TCCGCACCCG CGACGGCGAG CTGAGCGCCG ACGCGGTCGT CCTCGCGGCG GGCCTCGGCA GCGAGGCGCT GGCGCGGAGC CTGGGCGTGC GGCTGCCGCT GACCTCGTCG CCCGGCATCC TCATCCACAC CAAGCCGCAG CCGCCTCTGA TCGACCGGCT CGTCTTCGCG CCGCACAGCA GCTTCCGCCA GACCGTCGAC GGCCGCATCG TCAGCAGCAG CAGCGGCCAT GAGGGCGGCG GCGGCACCGG CGATCCCGCC GCGATCGGCC GCGCCATATT GGCCGGCGCG GCGGACTATC TGCCGCAGAT CCGCGACGCG GCGATCGACC GGGTCACGAT CGGCCAGCGG GTGCTGCCCG GCGACGGCTT CCCGATCGTC GGCTTCGTCC CCAAGGTCGA CCGGCTCTAC GTCGCCGTCA CCCATAGCGG CGTCACGCTG GCGCCGGTGC TGGGGCGCTG GGCCGCGACC GAGATCCTCG ACGGGGCGCG GGTCGACCTG CTCGATGGCT TCCGCCCGGC GCGGTTCGGC TGA
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Protein sequence | MDRRQALRLL AASAFALGSA RPALAAPGGP RKVVVIGAGI LGAAIGYELA KRGADVTILD RTGPAAGATG NSFAYLNAST KASSRPYFGL NWLGMAGWRA WQQEPGAALP LRWGGAVYWR GDAAATQQLA ASLNTVRGWG YAGQAVDGAD IRRLVPSVTV PGDPSGAFFP EEGSVDPAEA VAALLARARQ HGARTVFPAE VTGLIVAGGQ VRGVRTRDGE LSADAVVLAA GLGSEALARS LGVRLPLTSS PGILIHTKPQ PPLIDRLVFA PHSSFRQTVD GRIVSSSSGH EGGGGTGDPA AIGRAILAGA ADYLPQIRDA AIDRVTIGQR VLPGDGFPIV GFVPKVDRLY VAVTHSGVTL APVLGRWAAT EILDGARVDL LDGFRPARFG
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