| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3530 |
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| Symbol | |
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| ID | 5197368 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3886692 |
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| End bp | 3887567 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640583085 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001264014 |
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| Protein GI | 148556432 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.0869195 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.311442 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAAGAC TGCCCCCGCT GACTGCGATC GAGGCCTTCG TCCAGGTCGC CCGGCTCGGC
TCGGTCAAGG CCGCCGCCGA GGAACTGGCG CTGTCCTCCC CGGCGCTCAG CCGCCGCGTC
CAGGCGCTCG AGCGCTTCAT GGGGCGCAAC CTGTTCGAGC GCCGCCACCA GGCGATGATC
CTGTCGACCG AGGGCGAGAA GCTGCTGTCG CGGATCGCCC CCGCGCTCGA CCAGCTCACC
CTGGCGATCG ACGCCACCTC GGGCGAGAGC GAGCTGCTGC GGCTGCGGCT CGGGGTGATG
CCGCTGTTCG CCTCGCAGCG GCTGATGGGC CGGTTGCCCG AACTGCGCGG GCTCCATCCC
GAACTGCATA TCGACATCGA CACCGCCAGC CATGCGCTGG CCCGGCTGGG CGAGGGGGTC
GACGCCGCGA TCGTGCTGGC GCGCGACATT GATTCGAGCC TCTATTCGCG GCGGATCGAC
CGCGACACCG CGGTCGCGAT CGTCAACCGA TCGCTGCTGA CCGGCCGCTA TCCGGTCAGC
AAGCTCGACG ATATCGGCCG GCTGACCATC TTCCTCCACC GCGACATGCC CGAGCTGTTC
AACATGTGGC GCGAGGCGCT CGGCCGGCCC GACATCGAGC CGGCGGCGGT CGACCTGTTC
GATTCGGGCC AGCTCATGCT CGACGCGGCG GCGCAGGGGC TGGGGGTGGC GTTCATGCTC
AAGAGCCATC TCGACGACGC GCATGACGAC CGGCTGGCCA GCCTGTTCGA CGACAGCGTC
GAGAGTCCCT ACGGCTATTG GTTCGCCTGC CGCCGCCCGG CGCTGTCGAC CCGCGCGGTG
CGGCTGTTCC ACGACTGGCT GTTCGCGGCG GCGTAG
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| Protein sequence | MRRLPPLTAI EAFVQVARLG SVKAAAEELA LSSPALSRRV QALERFMGRN LFERRHQAMI
LSTEGEKLLS RIAPALDQLT LAIDATSGES ELLRLRLGVM PLFASQRLMG RLPELRGLHP
ELHIDIDTAS HALARLGEGV DAAIVLARDI DSSLYSRRID RDTAVAIVNR SLLTGRYPVS
KLDDIGRLTI FLHRDMPELF NMWREALGRP DIEPAAVDLF DSGQLMLDAA AQGLGVAFML
KSHLDDAHDD RLASLFDDSV ESPYGYWFAC RRPALSTRAV RLFHDWLFAA A
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