Gene Swit_3488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3488 
SymbolmdoG 
ID5198069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3834778 
End bp3836940 
Gene Length2163 bp 
Protein Length720 aa 
Translation table11 
GC content72% 
IMG OID640583037 
Productglucan biosynthesis protein G 
Protein accessionYP_001263972 
Protein GI148556390 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3131] Periplasmic glucans biosynthesis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCGG ACCGGCGCGC CGGACGCCGG GCGGGTGACG ATCCTTCGCC GCCGATCCTG 
ATGCCGGTCC CCGAGTCCGC CCCCGAACCC GCATCGCTGT CGCAGGCGCC CCGCTGCGGT
GCGCGCACCC GGAGCGGGGC GCCGTGCCGG TCGCCCGCCG TGCAGGGCCG GGCGCGCTGT
CGCATGCATG GCGGCAAGGG CGGCGGCGCG CCGCGCGGCA ATCGCAACGC CTGGAAGCAT
GGCGCCTATT CCCGCCGCAC CCTGGAGATC GCCCGCATCC TCCGCGCGAC CAGCCCCGCC
GCGATCCGCC GGATGCTGCG CGACGAAGGG GGCGAGGGGG ACGCGAGGGA CGAGGGGACC
GACGCGGGAA AAATGAAAAA CGAGCGGACA ACCCCATGCA ACGGGAAGGA GGGCCCGAAA
GAGGGCCCGT CCGCCGCCGC GTCCCCTGCG CCCGGCCGTC CGTCCGGCGC GCCCGGCGGA
ATGGCGGATT TCCGCCGCCC TGCGCCGCTA CAGCCCTCGT TCAGCTTCGA TGCCTATAGG
AACTTTCGCG CCGCTTATGG GTCTGGACCC TATCCTGTGT GGACCACAGG CGAAACGAAA
CCTAATCGGA CAGGCATGAT CGACAGACGG CAATCCATGG CACTGCTGGG AAGCGTCCTG
GCCTTCGGCG GAACCGCATG GGCCGCGCCC CGCGCTGCGG CGCGCGATGC GGCCGGGGCT
TCGGGGCGCG GCCGCGCGGC CGGCGAACCC TTCAGCTGGG ACTGGCTCAA GGGCCATGCC
GCCGCGCTGG CGCGCAGCCG GCCGACGCCG ATGCCGAAGC CCGATCCGCG CGCGCTCGCC
AACAATTACG ACGCCGCCAA CCGGATAAAC TTCCGGCCCG ATCGGACGAT CTTCGCGGAC
GACGGCTACG GCGTCCGCCT CTTCCCGCTG CTCAAGGCGG CGCCGGTCCC GGTCGAGATC
TCGATCGTCG AGCGCGGCCG CGCCCGGCTG ATCGAGCATA GCGAGGACAT GTTCCAGGTC
GGCCCCGGCG AGGGGCCCGA GCCGCACGTC CTGCCCGGCG TCGCCGGCTT CCGGGTGATG
AACCGCGGCG GGGTGGGGGA CTGGCTCGCC TTCCTCGGCG CCTCCTATTT CCGCTCGTCG
GGGCCGCTCC ACCAATATGG CCTGTCGGCG CGCGGCCTCG CCATCGACAC CGGCATCGAC
GGCAAGGAGG AATTCCCCGC CTTCACCCAT TTCTGGCTCG AACGGACCCG CGTCGGGATC
ACCATCTACG CGCTGCTCCA GGGCCCCAGC GTGGTCGGCG CCTGGCGCTT CGGCACCCGC
ATGGAGGCCG ATGCCGTCGT CCAGGACGTG TCCTCGGCGA TCTGGCTGCG CCGCGACGTC
GAACGGCTCG GCATCGCCCC GCTCACCAGC ATGTTCTGGT ATGACGAGGG CAATCCCCAG
GCGCGCGCCG ACTGGCGGCC GGAGATCCAC GATTCGGACG GGCTGCTGAT CCACAACAGG
GCGGGCGAGC GGCTCTGGCG CCCGCTCGGC AATCCGCCGC GCCCGACCAT CAACGCCTTC
GCCGATCCGC AGGGTGGCAG CGCCTTCGGC CTGCTCCAGC GCGACCGCGC CTTCGATCAT
TATCAGGACG ACGGCGTCTT CTACGAGAAG CGGCCGGGCC TGTGGGTCGA GCCTGTCGGC
GACTGGGGCC CCGGCGCGGT GATGCTCTAT GAGATCCCGA CCGCCAAGGA GACCGACGAC
AATATCGTCG CCTTCTGGAC GCCCGATCGC CCCGCGACGG CGGGGACCAG CTTCACCTTC
GACTATCGGC TGCGCTGGCT GGGCGGCGAG CCGGCGGCCC CCGCGCTGGC GCGGGTGGTC
GACCGCTGGA CCGGCACCGC CGGCCGGCCG GGGCTCGAAC CGATCGCCAA CGCCCGCCGC
CTCGTCGTCG ATTTCGAAGG CGCGGGGCTG AAGGGGCTGG ATCGCCGCTC GGGCGTCACC
GCCGCCGTCT CGGTCGACCA GGGCAGACTG CTCTCGGTCG ACGCCTATCC GGTGGTCGGG
CAGCCGGGGC GCTGGCGGAT GATCGCCGAC GTCACCCGCT CGAACCGCAC CGCGAATCTG
CGGGCGACGC TGGAAAAGGA CGGCCGGGCG CTCAGCGAAA CCGTCATCCA TCAATTCTAT
TGA
 
Protein sequence
MTPDRRAGRR AGDDPSPPIL MPVPESAPEP ASLSQAPRCG ARTRSGAPCR SPAVQGRARC 
RMHGGKGGGA PRGNRNAWKH GAYSRRTLEI ARILRATSPA AIRRMLRDEG GEGDARDEGT
DAGKMKNERT TPCNGKEGPK EGPSAAASPA PGRPSGAPGG MADFRRPAPL QPSFSFDAYR
NFRAAYGSGP YPVWTTGETK PNRTGMIDRR QSMALLGSVL AFGGTAWAAP RAAARDAAGA
SGRGRAAGEP FSWDWLKGHA AALARSRPTP MPKPDPRALA NNYDAANRIN FRPDRTIFAD
DGYGVRLFPL LKAAPVPVEI SIVERGRARL IEHSEDMFQV GPGEGPEPHV LPGVAGFRVM
NRGGVGDWLA FLGASYFRSS GPLHQYGLSA RGLAIDTGID GKEEFPAFTH FWLERTRVGI
TIYALLQGPS VVGAWRFGTR MEADAVVQDV SSAIWLRRDV ERLGIAPLTS MFWYDEGNPQ
ARADWRPEIH DSDGLLIHNR AGERLWRPLG NPPRPTINAF ADPQGGSAFG LLQRDRAFDH
YQDDGVFYEK RPGLWVEPVG DWGPGAVMLY EIPTAKETDD NIVAFWTPDR PATAGTSFTF
DYRLRWLGGE PAAPALARVV DRWTGTAGRP GLEPIANARR LVVDFEGAGL KGLDRRSGVT
AAVSVDQGRL LSVDAYPVVG QPGRWRMIAD VTRSNRTANL RATLEKDGRA LSETVIHQFY