| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3422 |
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| Symbol | |
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| ID | 5197748 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 3755303 |
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| End bp | 3756340 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640582969 |
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| Product | TonB-dependent receptor, plug |
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| Protein accession | YP_001263906 |
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| Protein GI | 148556324 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.209041 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.104319 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGAT CGACGCGTAT CCAGACCATC GCCAGTCTCG CCGCGCTCGG CTGGGCCGGG
GCGGCGCAGG CCCAGTCCGC CGCCGCGCAG GACCCGGCCC TCGACGAGAT CATCGTCACC
GCGCAGAAGC GCTCCGAAAG CGTGCAGGAC GTGCCGCTCG CCGTCTCGGC GGTCGGCGGC
GCGACGCTCG ACCGGCTCGG CGTCGGCAAC CCGCTGCAGC TCGGCGCGAC GGTGCCGAAC
TTCAACCTGC AGACCAACAG CGGCGTGACC TACATCTACC TGCGCGGCGT CGGGAACAAC
TTCCTCGGCC TCGGCATCGA CAGCAACGTC GCCTACCACG CCAACGGCGT CTACATCGCC
CGCCCGCGCG CGCAGGTGTC GAGCTATTTC GACGTCGACC GGATCGAGGT CGTCCGCGGC
CCGCAAGGCG ACCTCTATGG CCGCAACGCG ACCGGCGGCT CGATCAACGT CATCACCCGC
AAGCCGACCG ACGCCTTCTC CGCGAACGCC ACGCTGAGCG TCGGCAATTA CGGGCTGGTG
CAGGGCGAAG CCGGGGTCGG CGGGGCGATC GTGCCCGGCA AGGTCGCGGT CCGCGCCGCC
GGCTTCTTCG TCGACCGGGG CGGCTACGGC AAGAACGAGG CGACCGGCAA GGACGTCGAC
AACCGCAAGG AACAGGCCGG CCGGCTGACC GTCGAGCTGA CGCCGAGCGA GCCGCTGACG
ATCGAGATCA TCGCCGACTA TTTCCACGCC AACGACGCCT GGGGCGTGGT GCACCAGGCG
GGCAGCGGCA TCCCCGGCGC GCTGACCCTG GCGGAATCGC TGGGCAATTT CCCCAGCAAG
ATCCGCAACG TCGTCTCCGG CGTCGATCCC AACCGCAAGA TCCGCGCCTG GGGCGTGCAG
GGCACGGCGA CGCTCGACCT GGCCGACAAC ATGTCGCTCC GGTCGATCGC CATCGCAGGG
TCATTCTGCC CATGTCGGGC AGATGGTAGA GTTTCATTAT CGCTGGCATC CATATTACGG
CGGTCGTTTT CGGCATGA
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| Protein sequence | MKRSTRIQTI ASLAALGWAG AAQAQSAAAQ DPALDEIIVT AQKRSESVQD VPLAVSAVGG
ATLDRLGVGN PLQLGATVPN FNLQTNSGVT YIYLRGVGNN FLGLGIDSNV AYHANGVYIA
RPRAQVSSYF DVDRIEVVRG PQGDLYGRNA TGGSINVITR KPTDAFSANA TLSVGNYGLV
QGEAGVGGAI VPGKVAVRAA GFFVDRGGYG KNEATGKDVD NRKEQAGRLT VELTPSEPLT
IEIIADYFHA NDAWGVVHQA GSGIPGALTL AESLGNFPSK IRNVVSGVDP NRKIRAWGVQ
GTATLDLADN MSLRSIAIAG SFCPCRADGR VSLSLASILR RSFSA
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