| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3354 |
|---|
| Symbol | |
|---|
| ID | 5199236 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 3682357 |
|---|
| End bp | 3683508 |
|---|
| Gene Length | 1152 bp |
|---|
| Protein Length | 383 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640582900 |
|---|
| Product | luciferase family protein |
|---|
| Protein accession | YP_001263838 |
|---|
| Protein GI | 148556256 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.698383 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.734282 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTCT CGATCATCTA CGAAGCGCAG ATGGCGGACA CGTCCCCCGA ATCGGAGGTG
CGCTGCTTCA ACGAGATCGT CGAGCAGGTG ATGCTCGCGG AACAGGTCGG CTTCGACAAT
GTCTGGTGCG TCGAGCATAC CGCGCTGACC CAATATGCCC ATATGTCGGC GCCGGAGACG
ATGCTCGCCT TCCTCGCCGG CAAGACCAGC CGGATCGGCA TCGGCCATGG CGTCGTCTGC
CTGCCGCCGG CGATGAACCA TCCGGTCAAG GTGGCCGAGC GGATCGCCAC CCTCGACATA
TTGTCGGGCG GGCGCGTCCA TTTCGGCATG GGCAAGGGCG GCACCCAGCA GGAGGCCGGC
ACCTTCGGCT ACGACCTGGC CGAGCTGCAG CCGATGATCG ACGAGTCGAT GTACCTGATC
CCCAGGATCA TGACGCAGGA CGAGATCGAG CATGACGGCA AGTACATCAA GATCCCGCGC
CGGCCGATCC ATCCCAAGCC GCTGCAGACG CCGCACCCGC CGCTCTATTA TGCCTGCACC
CGCGAGGCGA CGCTGGAGCT GGCCGGCAAG CGCGGCATCG GCGCGCTGGT GCTGGGCTTC
TCGGGCCCCG AGGAGATCGC CCGCAAGAAC GCCGTCTATC GCGAGAATTT CCGCAACCGG
AAGGCCGAGG ACCAGGTCGG CGTGGTGCCG ACCGAGCATC TCGCCGCCTT CTGCGCGGCC
TGCGTGCTCG ACGACCGCGA GGAGGCGCGC CGCATCGGCC TGCGCGGCCA GCGCTTCTTT
GCCGAGGCGA TCGCCCACTG GTACCAGGGT GGCCCCAAGC CGTCGACCGA CGACCTGTCG
GCGGCGGAGC AGGAGGCCGC GTTGAACCAG GGCAAGGAAG CGGTCGTCGC CTATCTCTCC
GAAGAGAAGA TCACGATCGG CGACGAGCAT ACCAGCAACT ATTCGGTCGC CGAGGATGCC
TATGGCAATG CCGACGACTG CATCCGCTAC GTGACCCGAT TGCAGGAGGC CGGCGCCGAC
GAGGTGCTGT TCCTGTTCCA GATGGGCACC GTCCCGCACG CGTCGATCCT GGAGACGATC
CGCAACATCG GCACCAAGGT GATCCCGCAC TTCCGCGCCC AGGCGCAGCA GGCGGCGGTC
GCCGCGGAAT GA
|
|---|
| Protein sequence | MKFSIIYEAQ MADTSPESEV RCFNEIVEQV MLAEQVGFDN VWCVEHTALT QYAHMSAPET
MLAFLAGKTS RIGIGHGVVC LPPAMNHPVK VAERIATLDI LSGGRVHFGM GKGGTQQEAG
TFGYDLAELQ PMIDESMYLI PRIMTQDEIE HDGKYIKIPR RPIHPKPLQT PHPPLYYACT
REATLELAGK RGIGALVLGF SGPEEIARKN AVYRENFRNR KAEDQVGVVP TEHLAAFCAA
CVLDDREEAR RIGLRGQRFF AEAIAHWYQG GPKPSTDDLS AAEQEAALNQ GKEAVVAYLS
EEKITIGDEH TSNYSVAEDA YGNADDCIRY VTRLQEAGAD EVLFLFQMGT VPHASILETI
RNIGTKVIPH FRAQAQQAAV AAE
|
|---|
| |