| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3306 |
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| Symbol | |
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| ID | 5198620 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3634724 |
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| End bp | 3636259 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640582851 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001263790 |
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| Protein GI | 148556208 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000435597 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGTATTGC CGACGACATT GACGATGGGT GTTCTTCTCG ACGAGGCGGC GGGGCGCTGG
GGCGACCGGC CGTTCGTGCG CGAGGAGGAC GGCGGCGTCC TGTCCTTCGC CGGTTTCCGC
CGGGCGGCGC GCGCCGTGTC GGGCGCCCTG CTGGCGCGCG GCGCGCGCAA GGGCGATCGG
ATCGCGATCT GGGCGCCCAA CAGCGGCGCC TGGGCGGTCG CTGCCGCCGG CGCGACCCAG
ATCGGGCTCG AATTGATCCC GCTCAACACC CGCTTCAAGG GCGCCGAGGC CGAGGACATA
TTGCGGCGGG GCGAGGTGCG CTGGCTGTTC ACCGTTCGCG GCTTCCTGGG CCTCGACTAT
GCGGCGATGC TCGAAGGGCG CGACCTGCCC CGGCTGGAGG AGACCGTCTT CCTCGACGGT
CTCGACGCCT GGCTGGCGGC GAAGGGCGGG GCGGGCGACG CCGAGGTCTC GGCCGCGATC
GCGGCGGTCG GCGGCGACGA CACGGTCGAC ATCCTGTTCA CCTCGGGCAC CACCGGGCGG
CCCAAGGGGG TGATGAGCGG CCACCAGCAG AATCTGCGCA CCTTCCAGGC GTGGAGCGAC
GCGGTCGGGC TGCGCGAGGG CGACCATTAT CTGATCGTCA ATCCCTTCTT CCACACCTTC
GGCTACAAGG CGGGCTGGGT CGCGGCGCTG TTGCAGGGGG CGACGATCTT CCCCGTCGCG
CAGTTCAACG CCGCCCATGT GCTGGCGACG GTCGCGGCCG AGCGGATCAC GGTGCTGCCG
GGGCCGCCGA CCATCTTCCA GTCGCTGCTC GACGAACCGG CGCGGGGCGC GGCGGACACG
GCCAGCCTGC GGCTCGCGGT GACGGGTGCC GCCAGCGTGC CGCCGGTGCT GATCCGCCGC
ATGCACGACG AGCTCGGCAT CGACGAGGTG CTGACCGCCT ATGGCCTGAC CGAGGGCAGC
GGCTGCGTCA GCGCCACCCA GGCGGGCGAT CCGGTCGAGC TGGTCGCGTC GACCTGCGGG
CGGCCGATCC CCGGGGTCGA GGTGCGGCTG GTCGACGGCG CGGGCCGCGA CGTGCCGGCC
GGCGAGCCGG GCGAATTGCT GGTGCGCGGC TTCAACGTGA TGAAGGGCTA TCTCGACGAT
CCCCGGGCGA CCGCCGAGAC GATCGACGGC GACGGCTGGC TGCGCACCGG CGACATCGCG
ACGCAGGACG CGCGCGGCTA TCTGCGCATC ACCGACCGCG CCAAGGACCT GTTCATCTGC
GGCGGCTTCA ACTGCTACCC GGCCGAGATC GAGGCGCGGC TGCTCGAGCA TCCCGACGTC
GCGCGGGTCG CGGTGGTGGG GCGCCCCGAC GAGCGGATGG GCGAGGTCGG CCATGCGGTG
GTGGTGCCCC GGCCGGGCGC GGCGCGCGAC GGCAAGGCGC TGCTCGCCTG GTGTCGCGAG
CAGATGGCCA ATTACAAGGT GCCGCGCAGC GTCGAATGGG TCGACGAGCT GCCCGTCAAC
GCGGCGGGCA AGGTCCAGCG CTTCCTGCTC AAATGA
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| Protein sequence | MVLPTTLTMG VLLDEAAGRW GDRPFVREED GGVLSFAGFR RAARAVSGAL LARGARKGDR
IAIWAPNSGA WAVAAAGATQ IGLELIPLNT RFKGAEAEDI LRRGEVRWLF TVRGFLGLDY
AAMLEGRDLP RLEETVFLDG LDAWLAAKGG AGDAEVSAAI AAVGGDDTVD ILFTSGTTGR
PKGVMSGHQQ NLRTFQAWSD AVGLREGDHY LIVNPFFHTF GYKAGWVAAL LQGATIFPVA
QFNAAHVLAT VAAERITVLP GPPTIFQSLL DEPARGAADT ASLRLAVTGA ASVPPVLIRR
MHDELGIDEV LTAYGLTEGS GCVSATQAGD PVELVASTCG RPIPGVEVRL VDGAGRDVPA
GEPGELLVRG FNVMKGYLDD PRATAETIDG DGWLRTGDIA TQDARGYLRI TDRAKDLFIC
GGFNCYPAEI EARLLEHPDV ARVAVVGRPD ERMGEVGHAV VVPRPGAARD GKALLAWCRE
QMANYKVPRS VEWVDELPVN AAGKVQRFLL K
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