Gene Swit_3276 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3276 
Symbol 
ID5199852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3606937 
End bp3607461 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content72% 
IMG OID640582821 
Producthypothetical protein 
Protein accessionYP_001263760 
Protein GI148556178 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.52081 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.190198 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGT CCCGTTTCGG CGCCTTCGAC CAGATCGGCT TCCTCGTCGA CGATCTCGAC 
GCCGCGGTCG CGCGCTGGAT GGCGCATTCG GGCGTCGGCC CGTGGACCGT CTTCCGCAAC
GTCACGCTCG ACGGCGCCTA TCGCGGCGCG CCGACGACGG TCGGGATCGA CGTGGCGCTC
GGCTATCAGG GCGATGTCCA GATCGAACTG ATCGAGGCGA CCGACGCCGC CGCCTCGCCC
TATCGCGCGG CGGACGGCAG CCGGCTGCTC GGCCTCCACC ACCTCGCCCG CATCGTCGAC
GATCTCGACG CGGCGGTGGC GGCGGCGCAG GCCGGGGGCA TGGCGCTGGT CTTCGTGGCG
CGGAATCCCT CGACCCGGGT CGCCTATCTC GACGTGCCCG GCGATCCCGG CACGCTGTTC
GAGTTCATCG AGGGGCCCGG CCTGCGCGAG ATGTGCGATG CCGGGATCGC GGCGGCGCGC
GCCTGGGACG GCAGCGCGGC GGTGACGATG ATCGACCTGG CCTGA
 
Protein sequence
MSQSRFGAFD QIGFLVDDLD AAVARWMAHS GVGPWTVFRN VTLDGAYRGA PTTVGIDVAL 
GYQGDVQIEL IEATDAAASP YRAADGSRLL GLHHLARIVD DLDAAVAAAQ AGGMALVFVA
RNPSTRVAYL DVPGDPGTLF EFIEGPGLRE MCDAGIAAAR AWDGSAAVTM IDLA