| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3120 |
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| Symbol | |
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| ID | 5199575 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3428213 |
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| End bp | 3429778 |
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| Gene Length | 1566 bp |
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| Protein Length | 521 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640582668 |
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| Product | amidase |
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| Protein accession | YP_001263607 |
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| Protein GI | 148556025 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.766945 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGCG ATTCGAGCGC GACGACCGAC TTCTCCCGGC GCGATGCGCT GCTCGCCGGG
GTCGCGTCGG CGACGATGCT GGCGGGGGCC GGGGCGGCCG AGGCGCGCGT CGCCGGCCGC
CGCGCCGCGC CCCCGCCCGA GATCGTCACC TGGACGGCGG CCGACCTCGC CGCGCGCATC
CGCAGCCGCG CCGTGTCGTG CCGGGAGGTG ATGACGGCGC ATCTCGACTG GATCGACCGC
GCCAATCCGG CGCTGAACGC GATCGTCTCG CGGGTCGAGA GGCCCGCGCT GCTCGCCGCC
GCCGACGAAG CCGACCGCGA GATCGCCGCC GGGCGCCATC GCGGCTGGAT GCACGGCCTG
CCCCACGCGG TGAAGGACCT TGCCGCGACG CGCGGCATCC GCACCACCAT GGGATCGCCG
ATCTTCGCCG ACAATGTGCC CAAGGCCGAC GAGATCTTCG TCGAGCGGCT GCGCGCGGCG
GGCGCGATCC TGATCGGCAA GACCAACGTC CCCGAGTTCG GCCTCGGCTC GCAGAGCTAC
AACCCCGTCT TCGGCGTCAC CCGCAACGCC TATGACCCGT CGCGCACCGC GGGCGGCAGC
AGCGGCGGCG CGGCGGCGGC GCTGGCGGCG CGCATGGTGC CGGTCGCCGA CGGCAGCGAC
TTCGCCGGAT CGCTGCGCAA CCCGGCCGGC TGGAACAATA TCTTCGGCTT CCGTCCCTCG
GCCGGCCGCG TCCCCCACGG CCCGACCAAC GAGCTGTTCG TCCAGAATAT CGGCTATGAG
GGGCCGATGG CGCGTACGGT CGGCGATCTC GCGCTGCTGC TGTCGGTGAT GGCCGGCTAC
GACGCGCGCA CGCCGCTGTC GCTCGACGGC GACCCGGCGG TCTTCGCGGG CCCGCTCGAC
CGCGACATGA AGGGCGTCCG CATCGGCTGG CTCGGCGATC TCGGCGGCGT GCCGATGGCG
CCCGGCATGC TCGACCTCTG CCTGTCGGGG CTGCGGCGGC TGGAGGCGGC GGGCTGCGTG
ATCGAACCGG TCTCGCTCGA CATCGACCAT GACACGCTGT GGAAGGCCTT CGTCCAGCTC
CGCCAGGGCT TCCTCGCCGG CGGCCTCGGC CCGCTCTACG CCGATCCCGC CAGGCGCAAG
CTGCTCAAGC CCGAGGCGGT GTGGGAGATC GAGAATGGCA TGAAGCTGTC GGCAGTCGAC
CTCTACAACG CCTCGGTCGT CCGTTCGCGC GTCTACGAGG CCTATCGCAA GGCGTTCGAG
CGCCACGATT TCCTCGCCCT GCCGAGCGCG CAGCTCTTCC CCTTCGACGC GGACCTCCAC
TGGCCGAAGG AGATCGCGGG GGTGGCGATG GACAGCTACC ACCGCTGGAT GGAGATCGTC
GCCGGGCCGA GCCTGACCGG CTGCCCGGCG CTGTGCGTCC CCGCCGGCTT CGGCCCCGAG
GGGTTGCCGA GCGGCCTCCA GCTCGTCGGC CCCAGCCGCC AGGACCTCGC CGTCCTCCAG
CTCGGCCGCG CCTATGAGCA GGTCGCGGGG GATATCCTCG GCCGGAAACC CGCGCTGCTG
GGCTGA
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| Protein sequence | MTRDSSATTD FSRRDALLAG VASATMLAGA GAAEARVAGR RAAPPPEIVT WTAADLAARI
RSRAVSCREV MTAHLDWIDR ANPALNAIVS RVERPALLAA ADEADREIAA GRHRGWMHGL
PHAVKDLAAT RGIRTTMGSP IFADNVPKAD EIFVERLRAA GAILIGKTNV PEFGLGSQSY
NPVFGVTRNA YDPSRTAGGS SGGAAAALAA RMVPVADGSD FAGSLRNPAG WNNIFGFRPS
AGRVPHGPTN ELFVQNIGYE GPMARTVGDL ALLLSVMAGY DARTPLSLDG DPAVFAGPLD
RDMKGVRIGW LGDLGGVPMA PGMLDLCLSG LRRLEAAGCV IEPVSLDIDH DTLWKAFVQL
RQGFLAGGLG PLYADPARRK LLKPEAVWEI ENGMKLSAVD LYNASVVRSR VYEAYRKAFE
RHDFLALPSA QLFPFDADLH WPKEIAGVAM DSYHRWMEIV AGPSLTGCPA LCVPAGFGPE
GLPSGLQLVG PSRQDLAVLQ LGRAYEQVAG DILGRKPALL G
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