Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_3083 |
Symbol | |
ID | 5197795 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 3383407 |
End bp | 3384441 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640582632 |
Product | ornithine cyclodeaminase |
Protein accession | YP_001263571 |
Protein GI | 148555989 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2423] Predicted ornithine cyclodeaminase, mu-crystallin homolog |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCATG ACAACAGGCC GCAGCCGCCG CTGTGGATCG TAGAAGAAGA CGTCCGCCAG CTCGTTTCCC TGAACGACGC CATCGATGCG CTTGCCGACG GGCTGGTCCT CGAAGCCCGC GGCGAGGCGG GCAATGTCGA CAAGGCGCTG GGCCAGTGGA ACGCCAGCTC GATGCATGCG CTGGGGGCGA TGATGCCGCT GCGCGGCTAT GTGGCCTTCA AGACCTGGGC GAACACGCCG CGCGGCGCCG CGGCGGTCCT GTCGCTGTAT AGCGCCACCG ACGGCGCCCT GCTGGCGCTG ATGGAGGCTT CGGCGATCGG GACGCTGCGC ACGGCCGCCA TATCCGGGCT GGCGACGCGG CAACTGGCTT CGGACGACGC CGACGAGATG GCGCTGATCG GGACGGGCAT GCAATCGCCG ATGCAGATGG CGGCGATCGC CGCCGTGCGG CCCCTCAAGC GCATCCGGGT GTTCAGCCCC ACGCCGGAAA AGCGAAAGGC CTTCCTCGCC CGCGCCGAGG CGATGATGGG ATGCGAGATC GTCGAGGCCG GGAGCGTCGC CGAGGCGGTC GCGGGCGCGC CGATCATCAC CCTGGCCACG CGCGCCAGGG AGCCTTTCCT GACCACGGCG ATGGTGGACC GGGGCGCCCA TGTCAACGCG CCGGGCGCCA TCCTGCCGGG CAATGCCGAG TTCCACCAGG ACCTGTTCGA CCGCGCCGGC CTCGTCGTGG TCGACAACAA GCGCAATGCG GCCAAGGCTT CGCGCGAATT CGGCGAGCGC TATGGAGCCG ATGCGGCCCG ATGGGAGGGC GTGCATACGC TGGGCGAGAT ATTGGATGCG GGCATCAGAC GGGCCGAGGG CTCCGACGTC ACCTTGTTCA AGCCGATGGG CATGGGATTG AGCGACCTGG CCGTCGCCGC GCTGGTCTAT GAGCGCGCTA CGGGCGCGGG GTTGGGAACG CCCCTGCCGG TCGGAACACG CGCCGCGCCG CGTTGGACGG CCTTCGAGCA ACAACCGCAG ACGATGGTCG GCTGA
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Protein sequence | MSHDNRPQPP LWIVEEDVRQ LVSLNDAIDA LADGLVLEAR GEAGNVDKAL GQWNASSMHA LGAMMPLRGY VAFKTWANTP RGAAAVLSLY SATDGALLAL MEASAIGTLR TAAISGLATR QLASDDADEM ALIGTGMQSP MQMAAIAAVR PLKRIRVFSP TPEKRKAFLA RAEAMMGCEI VEAGSVAEAV AGAPIITLAT RAREPFLTTA MVDRGAHVNA PGAILPGNAE FHQDLFDRAG LVVVDNKRNA AKASREFGER YGADAARWEG VHTLGEILDA GIRRAEGSDV TLFKPMGMGL SDLAVAALVY ERATGAGLGT PLPVGTRAAP RWTAFEQQPQ TMVG
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