Gene Swit_3008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3008 
Symbol 
ID5197412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3295877 
End bp3296395 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content69% 
IMG OID640582557 
Producthypothetical protein 
Protein accessionYP_001263497 
Protein GI148555915 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAGATGA TCAAAATCGC GGCCGTCGCC GCCGCCCTCG CCGCGACTCC GGCGTTCGCC 
GCCGACTTCG CCGGGCCCTA TGTGGGTGGC GGCGTCACGC TCGACAACGT CCAGGGTTCG
GGCGCGCTCG AAGGCGTCGG CTTCTCGGGC GTCGGCGCGA CCGCGTTCGC CGGCTACAAC
CTGCCGGTCG GCGCTTCCAC CTTCGCCGGC GTCGAGGCGA ACATCGACCT CAACACCGCC
GATGCCGGCG GGATCGAGGC CAAGTGGGGC TGGGGCGTCG GCGCCCGTTT CGGCTACAAG
CTGAACGACA GCACCGCGCT CTATGCGCGT GCCGGCTATG CCCGCGGCAA GATCGAGGTG
CTCGGTTCGA GCGGCTGGGG CGACGGCGTG CGCTACGGCG CGGGCCTCGA GACCCGCGTG
ACCGACAGCG TGTCGCTGCG CGCCGAGTTC ACCCAGACCA ACTATGAATC GGACATCATC
AACAACCAGG GCACCCTGGG CATCGTGTTC GGTTTCTGA
 
Protein sequence
MKMIKIAAVA AALAATPAFA ADFAGPYVGG GVTLDNVQGS GALEGVGFSG VGATAFAGYN 
LPVGASTFAG VEANIDLNTA DAGGIEAKWG WGVGARFGYK LNDSTALYAR AGYARGKIEV
LGSSGWGDGV RYGAGLETRV TDSVSLRAEF TQTNYESDII NNQGTLGIVF GF