Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_3001 |
Symbol | |
ID | 5196888 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 3287761 |
End bp | 3289401 |
Gene Length | 1641 bp |
Protein Length | 546 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640582550 |
Product | beta-lactamase domain-containing protein |
Protein accession | YP_001263490 |
Protein GI | 148555908 |
COG category | [R] General function prediction only |
COG ID | [COG0595] Predicted hydrolase of the metallo-beta-lactamase superfamily |
TIGRFAM ID | [TIGR00649] conserved hypothetical protein |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGACTC CCGGTAATGA ACTGCTCTTC CTGGCGCTTG GCGGCTCCGG GGAGATCGGC ATGAACGTCA ATCTCTACGG CACCCAGGGC AAATGGGTGA TGGTCGACCT CGGCCTCACC TTCGCCGATC CCGGCTATCC GGGGGTCGAG CTGATCCTGC CCGACCTCGC CTTCATCGAG GAGCGCGCCG ACGACCTGCT CGGCGTCGTG CTGACCCATG GGCATGAGGA CCATATCGGC GCGATCCCCT ATCTCGCCGC CGACCTCGGC GTGCCGCTCT ACGCGACGCG CTTCACCGCC GAGCTGATCA AGGGCAAGCT CGACGAGGAA GGGCTGACCG GCAAGGTCGA CCTCCATGTG ATCGAGAATG AGGGCAGCTT CCAGCTCGGC CCGTTCGGCT TCACCTATGT CCCGCTCGCC CATTCGATTC CCGAGGGCAA CGCGCTGCTG ATCGACACGC CGCACGGCCG CATCTTCCAC ACCGGCGACT GGAAGATCGA CGAGGCGCCG CTGCTCGGCC AGCCCTCGAC CGCCGAGGAG CTGACCGCGA TCGGCGACCA GGGCGTGCTC GCGCTGGTCT GCGATTCGAC CAACGTCTTC AACGAGGAGG CGTCGGGCTC CGAGGCCGAC GTCCGCAAGG GCCTCGACGA GGCGATCGGC GCCTGCAAGG CGCGCGTGTT GGTGACGACC TTCGCGTCGA ACGCCGCGCG GCTCCAGACG CTGGGCGAGG TCGCGCAGGA TACCGGGCGC AAGCTGTGCG TCGCTGGCCG CTCGCTCGAC CGCATCATCC GCGTCGCCAA GGCGAGCGGC TATCTCCAGC ATTTCCCGCC GGTGATCGAC GTCGACGAGG CGATGCGCCT GCCCCCGCGG GAGGTGATGA TCATCGCCAC CGGCGGCCAG GGCGAGGCGC GCGCCGCGCT GTCGCGCATC GCCTTCGACA GCCACCCGAT CAAGCTGTCG GCGGGCGACA CGGTGGTGTT CTCGTCGAAG CAGATCCCCG GCAACGAGAT CGCGATCGGC CGCATCCAGA ACGCGCTCGC CGCCAAGGGG GTCGAGATGA TCACCGACCG CCAGGCCGAG GTCCATGTCT CGGGCCATCC GGGGCGGCCC GAGCTCAAGG CGATGTACGG ATGGATCCGG CCGGAGATCA TCCTGCCGGT CCATGGCGAG CTGCGCCACA TGGCCGAGCA GGCGCGCTTC GCCAAGAGCC TGGGGGTGCC GCACGGCATC GTCCAGTCGA ACGGCACGCT GGTGCGGCTG GCGCCCGACG GTCCGAAGGC GATCGGCCAT GAACGCACCG GCCGCCTCGT CCTCGATGGC GACGTGATCC TGCCCGCCGA CGGCTCGACG ATGAACGAGC GCCGCCGCGC CGGGCTCTAC GGCTTCGTCG GCGTCACCGT CGTGATCGGC AAGGACGGGC GGCTGAAGGG CGAGCCCGCG CTCCACCTGC AGGGCCTGCC GGTCGAGGAG GACCGCGAGG ACTTCGTCGC CGACGCCTGC GCGGCCGCGG CCGACGCGGT CGCCAAGGGC GGCAAGGACG AGGCCAAGCT CAGGGAAGCG ATCCGCCTCG CGGTGCGCCG CCGCGCGACC TCGTGGACCG GCAAGAAGCC GGTGGTCGAC GTCGCGATCA TCCGGGTCTG A
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Protein sequence | MTTPGNELLF LALGGSGEIG MNVNLYGTQG KWVMVDLGLT FADPGYPGVE LILPDLAFIE ERADDLLGVV LTHGHEDHIG AIPYLAADLG VPLYATRFTA ELIKGKLDEE GLTGKVDLHV IENEGSFQLG PFGFTYVPLA HSIPEGNALL IDTPHGRIFH TGDWKIDEAP LLGQPSTAEE LTAIGDQGVL ALVCDSTNVF NEEASGSEAD VRKGLDEAIG ACKARVLVTT FASNAARLQT LGEVAQDTGR KLCVAGRSLD RIIRVAKASG YLQHFPPVID VDEAMRLPPR EVMIIATGGQ GEARAALSRI AFDSHPIKLS AGDTVVFSSK QIPGNEIAIG RIQNALAAKG VEMITDRQAE VHVSGHPGRP ELKAMYGWIR PEIILPVHGE LRHMAEQARF AKSLGVPHGI VQSNGTLVRL APDGPKAIGH ERTGRLVLDG DVILPADGST MNERRRAGLY GFVGVTVVIG KDGRLKGEPA LHLQGLPVEE DREDFVADAC AAAADAVAKG GKDEAKLREA IRLAVRRRAT SWTGKKPVVD VAIIRV
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