| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2880 |
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| Symbol | |
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| ID | 5196159 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 3161069 |
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| End bp | 3162604 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640582430 |
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| Product | hypothetical protein |
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| Protein accession | YP_001263370 |
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| Protein GI | 148555788 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1232] Protoporphyrinogen oxidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0436694 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCGCG CCTCCCACCA TGTCGACGTC GCGATCATCG GGGCGGGCCC CGCGGGGCTG
ACCGCCGGCT ACATGCTCGG CAAGCAGGGC TTCACCGTCA CTCTGATCGA GAAGGACCCC
GACCAGGTCG GCGGGATCAG CCGCACCGTC GAGCATGAGG GTTTCCGATT CGACATCGGC
GGCCACCGTT TCTTCTCCAA GTCGCGCGAG GTGGTCGACC TGTGGAACGA GCTGCTGCCC
GACGACTTCA TCGAGCGGCC GCGGATGAGC CGCATCTATT ATCGCGGCAA ATATTACAGC
TACCCGCTGC GCGCCTTCGA GGCGCTGCGC AACCTGGGCC TGTGGCAGTC GACCTTGTGC
ATGGCCAGCT TCTTCCGCTG GAAGCTGTTC CCCCACAAGG AGGTGAAGAG CTTCGAGCAA
TGGGTCGTCA ACCAGTTCGG CGCCCGCCTG TTCGGCATTT TCTTCAAGAC CTATACCGAG
AAGGTGTGGG GCATGCCGTG CGACGAGATG TCGGCCGACT GGGCGGCGCA GCGGATCAAG
GGGCTGAGCC TGGGCAAGGC GGTGTGGGAC GGCGTCCGCC GCTCGCTGGG CCTCAACAGG
CGGCCCAATG ACGGGATGCA GGCCAAGACC CTGCTCGAAA GCTTCCGCTA TCCGCGCAAG
GGCCCCGGCA TGATGTGGGA CGCCGCGCGC GATCGCATCC TGGAGCAGGG CAACAACCTG
CTGATGGGAC ACATGCTCCA CCAGCTGTCG TGGGACGAGA CCGCCGGGCT GTGGCGGGTC
GCGGCGATGG CGCGCGACGG CCGGCTGGCG ATGCTGACCG CCGACCATGT GATCAGCTCC
GCGCCGATGC GCGAGCTGGC GAGCCGCATC CACCCGCTGC CGGCGACGCT GCCCGACGCG
ATGGCGCTCC ACTATCGCGA CTTCCTGACC GTCGCGCTGA TGATCCGGTC GGAGGACCTG
TTCCCCGACA ACTGGATCTA CATCCATGAC GATCGGGTGC AGGTCGGCCG CATCCAGAAT
TTCCGGAGCT GGTCGCCCGA GATGGTGCCC GATCCGGCGC TGGCCTGCGT CGGGCTCGAA
TATTTCTGCT TCGAGGGCGA CGGCCTGTGG TCGTCGTCGG ACGAGGACCT CGTCGCGCTG
GCGACGCGGG AGCTGGCGCA GCTCGGCCTG TGCGACCCGG CCGCCGTGGC CGGCGGCGCG
GTCGTCCGCC AGGAAAAGGC CTATCCGGTC TATGACGACG ACTATGCCGC CCATGTCGCG
GCGGTGCGCG GCGAGCTGGA GGCGCGCTAC CCGACGCTCC ACTTCGTCGG CCGCAACGGC
ATGCACCGCT ACAACAACCA GGACCATGCG ATGATGACGG CGATGCTGAC CGCCCGCAAC
ATCGCCGCCG GCGCCCGCCG CCACGACGTC TGGGCGGTCA ACGAGGACGC CGAATATCAC
GAGGCCGGCC GCGAGGGCGA CGATGCCGGC GTCGCCGCCG CGCTCCGTTC CGAACGCGCG
GTGCCGACCC GGATCGCCGA CAGGAAGGCG GCGTGA
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| Protein sequence | MPRASHHVDV AIIGAGPAGL TAGYMLGKQG FTVTLIEKDP DQVGGISRTV EHEGFRFDIG
GHRFFSKSRE VVDLWNELLP DDFIERPRMS RIYYRGKYYS YPLRAFEALR NLGLWQSTLC
MASFFRWKLF PHKEVKSFEQ WVVNQFGARL FGIFFKTYTE KVWGMPCDEM SADWAAQRIK
GLSLGKAVWD GVRRSLGLNR RPNDGMQAKT LLESFRYPRK GPGMMWDAAR DRILEQGNNL
LMGHMLHQLS WDETAGLWRV AAMARDGRLA MLTADHVISS APMRELASRI HPLPATLPDA
MALHYRDFLT VALMIRSEDL FPDNWIYIHD DRVQVGRIQN FRSWSPEMVP DPALACVGLE
YFCFEGDGLW SSSDEDLVAL ATRELAQLGL CDPAAVAGGA VVRQEKAYPV YDDDYAAHVA
AVRGELEARY PTLHFVGRNG MHRYNNQDHA MMTAMLTARN IAAGARRHDV WAVNEDAEYH
EAGREGDDAG VAAALRSERA VPTRIADRKA A
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