| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2820 |
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| Symbol | |
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| ID | 5198541 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 3107583 |
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| End bp | 3108203 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640582371 |
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| Product | electron transport protein SCO1/SenC |
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| Protein accession | YP_001263311 |
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| Protein GI | 148555729 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.439098 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0955603 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGGCC GCACCATGAA CAATCCGATC CTGTCGCGCG CGCTCGCCGC GCTGTTGCTG
CTGGCGGCTC CGCCCCTGCT GTCGGGCTGC GGCCCCGCGC GCGAGACGCC GCCGCTGGCC
GACGCGAAGA TCGGCGGCCC CTTCACCCTG ACCGACCAGG ACGGTCGCAA GGTCAGCGAC
GGCGATTTCG CCGGCAAGTA CCGGCTGATC TATTTCGGCT ACACCTTCTG CCCCGACGTC
TGCCCGGTCG ACGTGCAGAC GCTGATGAAG GGATATCGGA AGGTCGAGGC GTCGAACCCG
GCGCTGGCGG CGAAGATCCA GCCGATCTTC ATCACCGTCG ATCCCGCGCG CGACACCCCG
GCCGTGCTGA AGCAGTTCGT CCGCGCCTTC CATCCCAAGC TGATCGGCCT GACCGGCAGC
GAGGCCGAGA TCGCCGCCGT CGCCAAGGAA TTCGCGATCT ACTACAAGAA GCAGCAGGGC
TCGCCCGGCA CCCCCGGCTA TCTGGTCGAC CATAGCCGCC AGGCGATGCT GTTCGATCCG
CAGGGCAAGC CGCTGGCGCT GGTCGCGCAG GACAAGGACG CCGACACGGT CGCCGCCGAC
ATCGAGCGCT GGGCGCGCTG A
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| Protein sequence | MAGRTMNNPI LSRALAALLL LAAPPLLSGC GPARETPPLA DAKIGGPFTL TDQDGRKVSD
GDFAGKYRLI YFGYTFCPDV CPVDVQTLMK GYRKVEASNP ALAAKIQPIF ITVDPARDTP
AVLKQFVRAF HPKLIGLTGS EAEIAAVAKE FAIYYKKQQG SPGTPGYLVD HSRQAMLFDP
QGKPLALVAQ DKDADTVAAD IERWAR
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