| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2691 |
|---|
| Symbol | |
|---|
| ID | 5199041 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 2976182 |
|---|
| End bp | 2977144 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640582245 |
|---|
| Product | homoserine kinase |
|---|
| Protein accession | YP_001263185 |
|---|
| Protein GI | 148555603 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2334] Putative homoserine kinase type II (protein kinase fold) |
|---|
| TIGRFAM ID | [TIGR00938] homoserine kinase, Neisseria type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGTCT ATACCCAGGT CTCGACGGAG GAGATGACCG CCTTCCTCCA CCGCTACGAC
GTCGGCACGC TGCTGTCGGC GAAGGGGATC GCCGAGGGGG TCGAGAACAG CAACTACCTG
ATCGAGACGA CCGCCGGCCG CTTCATCCTG ACGCTCTACG AGAAGCGGGT GAACGTCGAC
GACCTGCCCT TCTTCTGCGC GCTGACCGAT CATCTCGCGG CCAAGGGCCT CAACATTCCG
CGCATGCTGC GCGACCGGCG CGGCGAGCAG CTCCAGACGC TGGCGGGGCG GCCCGCCTGC
CTGATCGAGT TCCTGTCGGG CGTGTCGGTG ACCCATCCGA CCCCGGCGCA GGCGCGTGCG
GCGGGCGGGG CGCTCGGCGA CATGCACAAG GCGCTGGGCG ACTTCCGGCT CGGCCGGCCC
AACAGCCTCG ACCTCGCCGG CTGGGGCGCG CTCGCGGCGC GGTGTGGCGC CGACCTCGAC
CATATCCAGC CCGGCCTGCG CGGCCGGGTG ATGGCGGAGG TCGAATGGCT GGAGGCGAAC
TGGCCGCGCC ACCTGCGGAC CGCGGTGATC CACGCCGATC TCTTCCCCGA CAATGTCCTG
ATGCTGGGCG ACGAGGTGAG CGGCGTCATC GACTTCTACT TCGCCTGCAC CGACATCCGC
GCCTGGGACG TCGCGGTGAC CCACGCCGCC TGGTGCTTCG AGAATGACGG CACCGGCTAT
CATGCCGATC TCGGCCGCGC GCTGGTCGCC GGCTACGACC GCCAGTTCGG GCTGTCGACC
GACGAGCGGC TGGCCTTCCC GATCCTCGCG CGCGGCGCCT GCCTGCGCTT CCTGCTGACC
CGCGCCTGGG ACTGGCTCAA CACGCCGGCC GACGCGCTGG TGACGCGCAA GGACCCGATC
GCCTTCCTGC GCCGGCTCGA CTTCTATGCC GAGGCCGATC CCGAAACGCT CGTCCCGGCC
TGA
|
|---|
| Protein sequence | MAVYTQVSTE EMTAFLHRYD VGTLLSAKGI AEGVENSNYL IETTAGRFIL TLYEKRVNVD
DLPFFCALTD HLAAKGLNIP RMLRDRRGEQ LQTLAGRPAC LIEFLSGVSV THPTPAQARA
AGGALGDMHK ALGDFRLGRP NSLDLAGWGA LAARCGADLD HIQPGLRGRV MAEVEWLEAN
WPRHLRTAVI HADLFPDNVL MLGDEVSGVI DFYFACTDIR AWDVAVTHAA WCFENDGTGY
HADLGRALVA GYDRQFGLST DERLAFPILA RGACLRFLLT RAWDWLNTPA DALVTRKDPI
AFLRRLDFYA EADPETLVPA
|
|---|
| |