Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_2531 |
Symbol | hisS |
ID | 5198145 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 2818372 |
End bp | 2819619 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640582085 |
Product | histidyl-tRNA synthetase |
Protein accession | YP_001263028 |
Protein GI | 148555446 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0124] Histidyl-tRNA synthetase |
TIGRFAM ID | [TIGR00442] histidyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAGGA TCGAAACACC GCGCCCGATC CGGGGCACGC AGGATATGCT GGGCGAGCAG GCATTGCGCT TCGGCCATGT CGTCCAGACC TTCGACCGGG TCCGCCGCCT CTACGGCTTC GGCCGGGTCG AGGTGCCCGT GTTCGAGCCG ACCGCGGTCT TCGCCCGCTC GCTGGGCGAG ACGACCGACG TCGTCTCCAA GGAGATGTAC AGCTTCGAGG ACCGCGGCGG CGATTCGGTG ACGCTGCGCC CCGAGTTCAC CGCCGGGATC GCCCGCGCCT ATCTGACCGA GGGCTGGCAG CAGCATGCGC CGCTCAAGGT CGCGACCCAC GGCCCGCTGT TCCGCTACGA ACGGCCGCAG AAGGGCCGTT ACCGCCAGTT CCACCAGCTC GACGCCGAGG TGATCGGTGC CGCCGAGCCG CAGGCCGATG TCGAACTGCT GTGCATGGCC GACCAGTTGC TGCGCGAGCT GGGCGTCGCG GACGGCGTGA CGCTGACGCT CAACACGCTC GGCGACGGCG AGACGCGCGA GGCGTGGCGC GCCGCGCTGG TCGCGCATTT CGAGAAGCAT CGCGGCGAGC TGAGCGAGGA CAGCCTCGAC CGGCTGGCCA AGAATCCGCT GCGCATCCTC GATTCGAAGG ACCCGCGCGA TCGCCCGGTC GCCGACGCCG CGCCCGAGAT CGACGATTAT CTGTCGGCCG AGGCGGGCGC CTTCTTCGCG GCGGTGACCA GCGGGCTCGA TGCCGCCGGG GTCGCCTGGA CGCGCAACGC GCGGCTGGTG CGCGGGCTCG ATTATTATCG CCACACCGCC TTCGAGTTCG TCACCGACCG GCTCGGCGCG CAGGGCACGG TGCTGGGCGG CGGCCGCTAT GACGGGCTGA TCGAGACGCT GGGCGGGCCC GCCACCCCCG CGGTCGGCTG GGCGGCGGGG ATCGAGCGGC TGGCGATGCT GATCGACCTG CCGGCGCCCG AGCGGATCGA GGTCGCGGTG GTGCCGATGG GCGAGGGCGC GCAGGCCTTT GCCGCCCGCG CGCTGGCCGA TCTGCGCCGC GCCGGCATCG CCGCCGACAT GGCTTACAAG GGCAATATGA AGCGGCGGAT GCAGAAGGCC GACGCGAGCG GCGCGCGCTA TGCGGTGATT ATCGGCGACG ACGAGGTCGC GCGCGGCGAG GTGTCGCTCA AGGACATGGC CGGGCAGACC CAGGCGCCGG TCGCGATCGA CGGGCTCGTG GCGGCGATCC GGGGCTGA
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Protein sequence | MSRIETPRPI RGTQDMLGEQ ALRFGHVVQT FDRVRRLYGF GRVEVPVFEP TAVFARSLGE TTDVVSKEMY SFEDRGGDSV TLRPEFTAGI ARAYLTEGWQ QHAPLKVATH GPLFRYERPQ KGRYRQFHQL DAEVIGAAEP QADVELLCMA DQLLRELGVA DGVTLTLNTL GDGETREAWR AALVAHFEKH RGELSEDSLD RLAKNPLRIL DSKDPRDRPV ADAAPEIDDY LSAEAGAFFA AVTSGLDAAG VAWTRNARLV RGLDYYRHTA FEFVTDRLGA QGTVLGGGRY DGLIETLGGP ATPAVGWAAG IERLAMLIDL PAPERIEVAV VPMGEGAQAF AARALADLRR AGIAADMAYK GNMKRRMQKA DASGARYAVI IGDDEVARGE VSLKDMAGQT QAPVAIDGLV AAIRG
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