| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2517 |
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| Symbol | |
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| ID | 5197037 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 2795369 |
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| End bp | 2797798 |
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| Gene Length | 2430 bp |
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| Protein Length | 809 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640582065 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001263014 |
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| Protein GI | 148555432 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGGAAGA CGACCATCTT GCTGGGAAGC GTGGCGCCGC TGGCGCTGGC GATGCTGGCG
GTGCCGGCAC AGGCGCAACA GGACGCGGGG GCGCAGGGGA GCGCCGCCGA GGCGCCGACC
GGCGGCGTCG AGGACATCGT CGTCACCGCG ACGCGCCGCG ACACCCGGCT GCAGCAGACG
CCGATCGCGG TCTCGGCGAT CACCTCCAAC ACCATCCAGC AGATGGCCCC GCGCGACATC
GGCGACCTCG CCGCCTTCGT GCCGAACTTC TCGGCCAGCC GCATCCCGAG CTTCAAGGCG
GCGGCGTTCG CGATGCGCGG CGTCGGCACC ACCACGATCA TCCCGTTCAA CGACGCGCCG
ATCGGCGTCG TCGTCGACGA CTTCGTGATG CCGTCGATCC AGACGCAGCT GCTCGACACG
TTCGACATCG CCCAGATCGA GGTGCTGCGC GGCCCTCAGG GCACGCTGTT CGGCAAGAAC
ACCACCGGCG GCGTCGTGGT GGCGCGCACC AAGCGCCCCG ACCTCGGCGC CTTCGGGGCG
CAGCTGCGGG GCGAGATCGG CGATTTCGGC ACCCGCGTCG TCCAGGGATC GATCGACGTC
CCGATCATCC AGGACGTGCT CGGCCTGCGC GTCGTCGGCA GCTACCGCCA TTCCGACGGC
TATATGTATA ACAACGCCTG CTACGGCCCG ATCACGCCGG TCGCGACCAC CGCCTTCGCG
CAATCCTATG CGGGGCGGAC CGGCTGCGGC GACGGCCGCG CGCTCGGCGG GGACGAGATG
TTCAACGGCC GGGTCAAGCT GCTGTGGAAG CCGACGTCCG GCATCACCGC GCTGCTGCAA
TATGAGATAG TGCGCGATTC GGGCGACGCG CCGGGGATCG TCAACCAGAC GCGGCCGGGC
TTCGTCTTCT ACAATCTCGG CTTCCGCCCC GGCACCGGCA ACCCGCTCAA GCGCGCGGGC
GCCAGCGACG GCGATTTCGG CTTCAACGAT TTCGACGCCG GCCAGGTCGT CAACAGCGAC
GGCGTCTACG CCAATGTCGA TATCGAGATC GGGAAGGGGA CGCTGAGCTC GGTCACCGGC
TACCGGTCGC AGCGGTCGCG CCTGCCGGGC AATTTCGCCG GCGCGGTCAG CCCGATCCGG
CTGTGGGACG CGTCGCGCGA CGACAATCGC AAGACCTTCC AGCAGGAGCT GCGCTACGCG
GTCGAGCTGT CCGACCGGAT CAACCTGGTC GCGGGCGGCT TCTACCAGCG CGACAAGGTC
GACTTCTGCG TCGCCTCGCT GCTCGGCTAT CTCGACCTGC TGCGCGGCCC GTCGGCGGTC
GGCAACTATG CCGACAATCC GCAGGTCGCC TGCAACAAGC AGCGCGCCAC CTCGACCGCG
CTGTTCGCCG AGGCCAATTT CGAGCTGACC GACCGGCTGA CGCTGACCAC CGGCGGGCGC
TACAGCTGGG ACAAGAAGCG CCTCGCCGCG CGGACCGCGG TGTTCGCGCA GCAGCTCGGC
GGCGGGATCG ATCCGTCGGT CACCTGGCGA TCGTTCGACA GCCCGTTCGA CTATGGCGAT
TTCGACCGCT ATCCCGCCGG CGTGCTGCGC GAGCGCGCGA GCTGGAAGGA GCCGACCTGG
CGCGCCAGCC TCAGCTACAA GGCGTCGCCG CAATTCTTCA CCTATTTCAC CTATTCGCGC
GGCTACAAGG CGGGCGGGTT CAACGAGCTG GGCACGTCGG GCGTGCCGCT GATCCAGGCT
CAGCTCGCGC CCTATGACCC GGAGAAGGCG GATTCGTTCG AACTGGGCTT CAAGTCGGAC
CTGTTCGACC GCAGGCTCCA GCTCAACATC GCCGGCTTCC ACGTCACCTA TGACGACGCC
CAGCGCCAGC TGCTCTTCCC CTTCACGCGC AGCGACGGCA CCAGCTTCAG CGAGATCCGC
TTCATCAACG CCGCCAAGAT CGAGGTGAAC GGCATCGAGG CGGAGGCGAC GCTGGTCCCC
ACCGACGGGC TGACGCTGCG CGGCACGCTC GGCTATCAGG ACGGCAAGTA TAAGAGCTTC
ACCTCGCCCA CCCCGACGGC GCGCAACCTG GTCGACGTGC CGCTCAACCG CACGCCCAAA
TGGCAGGCGT CGGGCAGCGG CAGCTACGAC ATCCCGATCG GCGGCATCGG CCGGATCACG
CTGTTCGGAT CGGTCACCTA TCAGAGCCGC AGCCTGTTCA ACTTCGACCT GAACAACCCC
GCCAACGACG CCTATCTCGA CGCGCGCACC CTGTTCAACG CGTCGATCGG CTTCACCGAC
GCCTCCGACC GCTATTCGAT CCGGCTGGTC GGGCAGAACC TCACCAACCA GCTCTACCTC
ACCGGCGGAC AGACGGTGGG CCAGCTCTTC ACCCGCGAGA CCTATGGCGC GCCGCGCTAC
GTTGCGGTCG AGCTCGGCGT GAAATTCTGA
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| Protein sequence | MGKTTILLGS VAPLALAMLA VPAQAQQDAG AQGSAAEAPT GGVEDIVVTA TRRDTRLQQT
PIAVSAITSN TIQQMAPRDI GDLAAFVPNF SASRIPSFKA AAFAMRGVGT TTIIPFNDAP
IGVVVDDFVM PSIQTQLLDT FDIAQIEVLR GPQGTLFGKN TTGGVVVART KRPDLGAFGA
QLRGEIGDFG TRVVQGSIDV PIIQDVLGLR VVGSYRHSDG YMYNNACYGP ITPVATTAFA
QSYAGRTGCG DGRALGGDEM FNGRVKLLWK PTSGITALLQ YEIVRDSGDA PGIVNQTRPG
FVFYNLGFRP GTGNPLKRAG ASDGDFGFND FDAGQVVNSD GVYANVDIEI GKGTLSSVTG
YRSQRSRLPG NFAGAVSPIR LWDASRDDNR KTFQQELRYA VELSDRINLV AGGFYQRDKV
DFCVASLLGY LDLLRGPSAV GNYADNPQVA CNKQRATSTA LFAEANFELT DRLTLTTGGR
YSWDKKRLAA RTAVFAQQLG GGIDPSVTWR SFDSPFDYGD FDRYPAGVLR ERASWKEPTW
RASLSYKASP QFFTYFTYSR GYKAGGFNEL GTSGVPLIQA QLAPYDPEKA DSFELGFKSD
LFDRRLQLNI AGFHVTYDDA QRQLLFPFTR SDGTSFSEIR FINAAKIEVN GIEAEATLVP
TDGLTLRGTL GYQDGKYKSF TSPTPTARNL VDVPLNRTPK WQASGSGSYD IPIGGIGRIT
LFGSVTYQSR SLFNFDLNNP ANDAYLDART LFNASIGFTD ASDRYSIRLV GQNLTNQLYL
TGGQTVGQLF TRETYGAPRY VAVELGVKF
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