Gene Swit_2509 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2509 
Symbol 
ID5199908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2785732 
End bp2786826 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content70% 
IMG OID640582057 
Productalkanesulfonate monooxygenase 
Protein accessionYP_001263006 
Protein GI148555424 
COG category[C] Energy production and conversion 
COG ID[COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.460049 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGTCA AGTTCATCGG CTATATCGGT TTCAACAATG AGAGCGAGAT CCATAGCCTT 
CGCCAGATCC GCGCGCTCGA CAAGGACTAT GTCGAGGCGG CGGCCAGGGC GCAGGAGGAA
GGCGGCTTCG ACCGCGTCCT GATCCCGTTC GGATCGAACA GCCCCGAAAG CCAGATCGTC
GCGGCGCACG CGGCGGCGAT CACCACCCGG CTCGGCTTCC TGATCGCGCA CCGCCCCGGC
TTCACCCAGC CGACCGTCGC CGCGCGCCAG CTCGCGACGC TCGACCAGCT GTCGGGTGGG
CGCGTCGCGG TCCACATCAT CACCGGCGGC GCCGACGCGG AGATGGCCAA GGACGGCGAC
GACTCGCACA AGGCGCAGCG CTATGCCCGC ACCGACGAAT ATCTGACGGT GCTGCGCCGC
GAATGGACCG CCGAGACGCC GTTCGACCAT GACGGCGACT TCTACCGCAT CCGCCAGGGC
TTCGCGGCGG TGAAGCCGCA GAACCTGCCG GTCTTCTTTG GCGGCTCCTC GCCCGAGGCG
ATCGACGTCG CCGGCCGCCA TGCCGACGTC TACGCGCTGT GGGGCGAGAC GCAGGAGCAG
GTGCGCGAGG CGGTCGCCAC GATCCGCGCC TCGGCCGCGC GCTATGGCCG CCGGCCCGGC
TTCTCGCTGT CGCTGCGGCC GATCCTCGCC GATACCGAGG AGGCGGCGTG GAAGCGCGCC
GACGAGATCG TCGCAATCGT CCGCGAGATC CGCGAGCGCA ACGCGGTCGC GACCAGCGAC
CATGCGCCGC CCAACGCCGG GTCGCAGCGG CTGCTGCAGA CCGCGCGCGC CGGCTATCGC
GCCGACAAAA GGCTGTGGAC CGGGCTCGCC GCCGTCGCGG GCGCGCAGGG CAACTCGACC
GGGCTGGTCG GCACGCCCGA GCAGGTCGCC GACGCGCTGA TCGACTATTA CGACCTCGGC
ATCGATCATT TCCTGATCCG CGGCTTCGAT CCGCTCGGCG ACGCGATCCA ATATGGCCGC
GAGCTGCTGC CGCTGGTCCA TGAGCGGGTG GCGCGGCGCG ACGCCGAGCG CGGCGAGGAA
AAGGCGGTCG CGTGA
 
Protein sequence
MPVKFIGYIG FNNESEIHSL RQIRALDKDY VEAAARAQEE GGFDRVLIPF GSNSPESQIV 
AAHAAAITTR LGFLIAHRPG FTQPTVAARQ LATLDQLSGG RVAVHIITGG ADAEMAKDGD
DSHKAQRYAR TDEYLTVLRR EWTAETPFDH DGDFYRIRQG FAAVKPQNLP VFFGGSSPEA
IDVAGRHADV YALWGETQEQ VREAVATIRA SAARYGRRPG FSLSLRPILA DTEEAAWKRA
DEIVAIVREI RERNAVATSD HAPPNAGSQR LLQTARAGYR ADKRLWTGLA AVAGAQGNST
GLVGTPEQVA DALIDYYDLG IDHFLIRGFD PLGDAIQYGR ELLPLVHERV ARRDAERGEE
KAVA