Gene Swit_2499 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2499 
Symbol 
ID5199484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2774691 
End bp2775074 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content70% 
IMG OID640582047 
Productendoribonuclease L-PSP 
Protein accessionYP_001262996 
Protein GI148555414 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGCGC AGAGCTTCCA CCTCCGGCCC GGCGGCGAGA AGGCGTTCGG CTATGCCCAG 
GCGGTGCGGG TCGGCGACAC GCTCCACATC GCCGGCTCGC TGAGCCTCGA CGAGGATTTC
GCGCCGCTCC ATGCCGGCGA CATGGGCGGC CAGATCGGCG CGGCCTATGA CGCGATCCGC
CGCACCCTGG CGGCGTTCGG CGCCACCCTC TCCGATGTCG TGCGCGAGAC GATCTACGTC
ACCGACATGG ACGCGTTCAT CGCCGCGAAC GGGGTCCGCA TGGACGCCTA TGCCGGCTGG
CATCCGGCGA CGACGGCGGT CGAGGTGCGG CGGCTGGCCT TCCCCGAATG CATGGTCGAG
ATCGAAGTGA CGGCCGTCCT GTGA
 
Protein sequence
MAAQSFHLRP GGEKAFGYAQ AVRVGDTLHI AGSLSLDEDF APLHAGDMGG QIGAAYDAIR 
RTLAAFGATL SDVVRETIYV TDMDAFIAAN GVRMDAYAGW HPATTAVEVR RLAFPECMVE
IEVTAVL