Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_2454 |
Symbol | |
ID | 5196894 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 2724272 |
End bp | 2725534 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640582001 |
Product | capsule polysaccharide biosynthesis protein |
Protein accession | YP_001262951 |
Protein GI | 148555369 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3562] Capsule polysaccharide export protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.7295 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCTGC ACGACATCGC CAAGCAGCGC TTCCTGTTCC TGCAGGGTCC CCCCGGTCCC TTCTTCGACC GGCTCGGAGC GGCGCTGCGC GAGCTGGGCC ATGCCGTCCA TCGCATCAAC CTCAACGCCG GCGACGCCGC GTCCTGGACC GGCCCCGCGA TCGACTATCG CGGCACCGCC GAGCGCTGGC CGAGCTTCGT CGACGACTAT CTGGTCCAGC ATGCGATCAC CGACGTGATC CTGTTCGGCG ACTGCCGCCC GCTCCACAAC GCCGCGCGCG GCATGGCGCG GCTGCGCGGC GTGCGCGTCC ACGTCTTCGA GGAAGGCTAT ATCCGCCCCG ACTGGGCGAC GCTGGAGCTC GACGGCGTCA ACGGCCACAG CTCGCTGCCG CGCGATCCCA AATGGTATCT CGACGCGGCG CGGACCCTGC CGCCGCTCGC CAAGCTGCCG ACCGTGCCGT CGCGCTTCCG GCGGCGCGCG CAGGAGGCCA CCAGCTATTA TGCGCGGACC TCGATCGGCC GCTGGCGCTT CCCGCACTAC AAGTCGCACC GCGACCGCTC CGCCCCGGCC GAGGCGCTCG GCTGGCTCAA GCAGTTCGCG CTGCGCAGCG TCCATGAGGA GCAGGCCGAG ACCGCGCTCG CGACGCTCGA GGGCAAGCGC TATTTCGCGC TGCCGCTCCA GCTCTCGTCG GACCACCAGA TCCGCGTCCA TTCGCTGTTC GGCACGATGC AGGCGGGCGC CTCCTATGTG ATCGAGAGCT TCGCCCGCTC GGCGCCCGGC GACACCTATC TACTCGTCAA GGAACATCCG CTCGACAGCA GCCTGTTCAG CTGGCGCCGC TTCATCCGGC GCGAGGCGCG GCGGCTCAAC GTCGAGGACC GGGTGCTCTT CGCCAAGGGC GGCAAGATCG ACGACATCGT CGAGAATTCG CTGGGCGTCG TCACCGTCAA CAGCACCACC GGCACGCTGG CGCTGGCCTG CGGCATCCCG GTGATCGCGC TGGGCCAGGC GGTCTACAAC ATCCCCGGCA TCACCTTCGA AGGTCCGCTC GACGCCTTCT GGAGCAACCC GACCCCGCCC GACCCGCGCA TCTGGGACGC CTTCTCGCGC GTGCTCCAGG CCCGCTGCCT CGTCTATGGC GGCTTCGCCA GCGACGAGGG GATCGAGATG CTGGTCGAGG GATCGATCGC CCGCCTGGTC GAAGCGTCGA AGATCATCGA CCTGAGCCGC TATCTGGAAG GCACCGCGCA GGCCGCGGAG TAA
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Protein sequence | MKLHDIAKQR FLFLQGPPGP FFDRLGAALR ELGHAVHRIN LNAGDAASWT GPAIDYRGTA ERWPSFVDDY LVQHAITDVI LFGDCRPLHN AARGMARLRG VRVHVFEEGY IRPDWATLEL DGVNGHSSLP RDPKWYLDAA RTLPPLAKLP TVPSRFRRRA QEATSYYART SIGRWRFPHY KSHRDRSAPA EALGWLKQFA LRSVHEEQAE TALATLEGKR YFALPLQLSS DHQIRVHSLF GTMQAGASYV IESFARSAPG DTYLLVKEHP LDSSLFSWRR FIRREARRLN VEDRVLFAKG GKIDDIVENS LGVVTVNSTT GTLALACGIP VIALGQAVYN IPGITFEGPL DAFWSNPTPP DPRIWDAFSR VLQARCLVYG GFASDEGIEM LVEGSIARLV EASKIIDLSR YLEGTAQAAE
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