| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2441 |
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| Symbol | |
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| ID | 5196238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 2712485 |
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| End bp | 2713117 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640581988 |
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| Product | TonB family protein |
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| Protein accession | YP_001262938 |
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| Protein GI | 148555356 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.124389 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCCATG GAGGTTTTCT CGACCAAGGC AAGACGACCA ACAAGATCGG CCTGACGCTC
GTCATCGCCG GCCATGCGGC GGTCCTCGCC GCGCTCGCGC TCGCGCCGCC CGAGGCGATC
CAGCGCATCG TCTATCTTCC CACCATCGTC GAAAGCATCC GGGAGGCGAC CCCGCCGCCC
GTCGAACCGC CGCCCCCGCC GGCCGCCGAG CCGGAGCGGG CGCAGCCGAC CAGGGTCGAT
CCGATCGTCC GGGCCGGCGA TCCGGTGCGG CCGATCGAGC TGACCCCGCT GCCGCCCCGG
CCGCTGCCGC CGGTGCTGCC GCAGATCCCG GCGGCGTCCG AACCGGCGAT GCTGCCGGCG
ACGATCGATC CGTCGGCGGT GGCGCGCTTC CAGCCCGACT ATCCGTCCGA GCTGGTCCGC
GCCGAGCTGG AGGGGAGCGC CACCGTCCGG GTGCTCATCG GCATCGACGG CCGGGTGAAG
GCGGTCGAGA TGGTGAGCGC CACCCACCCT GGCTTCTTCG ACGCGACCAA GCGGCAGGCG
CTGCGCTATT GGAGATTTCG GCCGGCGACG AAGGACGGCA TCGCCACCGA AAGCTGGCGG
ACGATGACGG TGCGCTTCAC CCTCAAGGAC TGA
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| Protein sequence | MTHGGFLDQG KTTNKIGLTL VIAGHAAVLA ALALAPPEAI QRIVYLPTIV ESIREATPPP
VEPPPPPAAE PERAQPTRVD PIVRAGDPVR PIELTPLPPR PLPPVLPQIP AASEPAMLPA
TIDPSAVARF QPDYPSELVR AELEGSATVR VLIGIDGRVK AVEMVSATHP GFFDATKRQA
LRYWRFRPAT KDGIATESWR TMTVRFTLKD
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